Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1855 ATGGCATATCACAAGGCTCTTCTCAAGCTTGTCGTAAAAGAAGCTGTTCTTATCAAACCATCAAAACCCACTCCTTCCTCTATTCTTTCTCTGTCTACAATTGACAACATACCTGACCTTAATCGCCTATGCCAAACCATTCATGTATACCGATCAACAATTCATGATTTCCCAAATGGGCAACTACTACAAGACCCTACTCATGTGATCAAAGAAGCACTCTCAAAGGCTTTGCTTTATTATTACCCTCTTGCAGGTAGGTTAGTAAAGCACACTGATGGAAAACTTAGACTCAATTGTAGTGAAGATGGTGTTCCATTCTTGGAGGCAAATGCTGACTGCCACCTTTCATCTCTACATTACTTGGATGGCAGTGACATGGAATATGCAAAACATTTAGTGTTTGATCTTCCTTCTCAAGATGAAAATGGTTACCAATACCCCTTGGTGTTCAAGGTGACAAAATTTCCATGCGGTGGTTTCACAATTGGAATGGGATTGTCACATGCTGTTTGTGACGGCATTGGAGCATCTCAGTTATTCAGAGCCATCATTGAACTTGTAAGGGGAAAAAGCGAGCCTTCTGTGAAGCCTGTGTGGGAGAGAGAGAAACTAGTTGGATCAATCACCGAACAACCATTGCAAATGGATTCTGTGGATGAATCTTCAGCTGCAGTTTCACCCTTTCTACCGACTAAAGTTCTTCTGAATGAATGCATTAAGGTGGATAGTGAGAGCATTAGAAGACTCAAGATGAGTTTGATGAAGGAATGTGACAATGTTGAAAACTTCACAAGTTTTGAATCACTTGCTGCGTATGTGTGGAGATCAAGAGCTAGAGCCTTAGAATTGAGCTATGATGGGAAAATCATGCTAAATATCACAGTTGGGGTGAGAAGGCACATGATGGATCCTCCTTTGCCTAAAGGGTATTATGGGAATGCTATTGTGGATGCAGAAGTTATCTTAACAGTGAGAGAACTCAATGAAAAACCACTTTCTGAGGTTGTGAAGCTCATCAAAGAAAGCAAGAAGGTTGCTTTTAACAGTGATTATGTTAGAAACTTTATCAACACTCTAGAGACAGAACAAGAGGATTTTAACATTGAAGGAACTGGTGCATTCACAACTATGACTGATTGGAAGCACTTGGGTTTCTTGGAAAATGTAGATTTTGGATTTAAGGAACAAGTGAATACTGTACCTGCACCATGTGACATGTTTGGGTCAGTGGATTTATGCATTTTCTCACCTCTTAGTAAAGTGGATTCTTCAATGAAAGGAGGAGTGAGGATTTTTGTGTCCCTTCCTAGTGCTGCCATGATCAAGTTCAAGGAGGAGATGGAGGATCTCAGCCTTTTGAATTGA 1368 0.405 MAYHKALLKLVVKEAVLIKPSKPTPSSILSLSTIDNIPDLNRLCQTIHVYRSTIHDFPNGQLLQDPTHVIKEALSKALLYYYPLAGRLVKHTDGKLRLNCSEDGVPFLEANADCHLSSLHYLDGSDMEYAKHLVFDLPSQDENGYQYPLVFKVTKFPCGGFTIGMGLSHAVCDGIGASQLFRAIIELVRGKSEPSVKPVWEREKLVGSITEQPLQMDSVDESSAAVSPFLPTKVLLNECIKVDSESIRRLKMSLMKECDNVENFTSFESLAAYVWRSRARALELSYDGKIMLNITVGVRRHMMDPPLPKGYYGNAIVDAEVILTVRELNEKPLSEVVKLIKESKKVAFNSDYVRNFINTLETEQEDFNIEGTGAFTTMTDWKHLGFLENVDFGFKEQVNTVPAPCDMFGSVDLCIFSPLSKVDSSMKGGVRIFVSLPSAAMIKFKEEMEDLSLLN* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1855 455 Pfam Transferase family 10 450 - -
Apr10g1855 455 PANTHER ACYL TRANSFERASE 4 7 452 - -
Apr10g1855 455 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 452 - -
Apr10g1855 455 Gene3D - 232 449 IPR023213 -
Apr10g1855 455 Gene3D - 6 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1855 Apr-Chr10 31561383 31562750 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1855 8 403 Monolignol Biosynthesis Gene Families AT5G48930 27.981 3.51e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1855 K20240 - gmx:100801843 557.37