Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1853 ATGGAGACCGAAGTTGACTCAAAAGATAGCTCTCTCATTCTGCTCAAACAAGGAGCTGAAGCTAGGGTTTTTGAGTCATCTTTTGTGGGAAGGAGGTCTGTTGTCAAGGAACGCTTCTCAAAGAAGTACAGGCATCCAACTTTGGATTCTAAATTGACAGTCAAGCGTTTAAATGCGGAGGCCAGGTGCATGACCAAAGCAAGGCGACTTGGGGTTTATACTCCAGTGCTGTATGCTGTGGATCCTGTCTTGCACACTTTAACTTTTGAATATGTTGAGGGCCCTTCTGTCAAAGATGTTTTGCTTGAATTCGGGTCACATGGTGTTGATAAAGACCAGCTGAACAATATTGCATCCCAAATTGGTGATGCTATTGGAAAGTTACATGATGGTGGCCTTATTCATGGTGATTTAACGACATCAAACATGTTACTGAAGAATGATACCAATCAGTTGGTTCTTATTGATTTTGGTTTGAGCTTCACATCAACTCTACCAGAAGATAAAGCTGTTGATTTGTATGTTCTGGAAAGAGCCCTTCTGTCAATGCATTCTTCATGTGGGAATGTGATGGATCAGATACTTGCTGCATACCGCAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGCTGGCGCAAGTGCGACAAAGAGGACGAAAGAGGACCATGGTTGGATGA 681 0.4288 METEVDSKDSSLILLKQGAEARVFESSFVGRRSVVKERFSKKYRHPTLDSKLTVKRLNAEARCMTKARRLGVYTPVLYAVDPVLHTLTFEYVEGPSVKDVLLEFGSHGVDKDQLNNIASQIGDAIGKLHDGGLIHGDLTTSNMLLKNDTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHSSCGNVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1853 226 Pfam Protein kinase domain 49 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1853 226 SUPERFAMILY Protein kinase-like (PK-like) 15 174 IPR011009 -
Apr10g1853 226 SMART serkin_6 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1853 226 Gene3D Phosphorylase Kinase; domain 1 20 92 - -
Apr10g1853 226 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 15 220 IPR022495 GO:0004674
Apr10g1853 226 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 1 226 IPR022495 GO:0004674
Apr10g1853 226 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 1 226 - -
Apr10g1853 226 Gene3D Transferase(Phosphotransferase) domain 1 107 223 - -
Apr10g1853 226 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
Apr10g1853 226 ProSiteProfiles Protein kinase domain profile. 9 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1853 2 160 MAP Kinase Kinase Kinase AT5G66710 29.448 2.88e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Apr10g1853 Pkinase 2.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1853 K08851 - gmx:100782376 406.371