Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1852 ATGTCCAGTAGCCGAACTAATTTGGAGAAGAAAAGACTCAATGGCCACTATTTCAAGAAACATTCCAAAATTCAGGTAAAGAATATTAAGCCTAATAAAGTTTGCCACCTCTTTGTTATCAACACAATTTTAATTCCATGGCAAAACCTAAAGAAGCCCCTTTCCCTTGATATGAAGAATGTTGTGATCATTAAACCTTCCAAGCCTACTCCATCTAATATTCTTCCTCTATCCACCATTGACAGTGATCCTGTTCTCAACATTCTTTGTCAAACTATTTATGTTTACCAAGCAAATATTGATTCCTCTAAGGGCCAAGTAGATCCTGCATGTGTGATAAAAGAAGCCATTTCAAAGGCTTTGGTTTACTATTATCCTCTTGCTGGGAAGATAATAACATTTGATGATGGAAAACTTGGAATCAATTGCAATGCTGATGGAGTTCCATTCTTGGAGGCAAATGCTAATTGTGAACTCTCTTCTCTTCACTATCTTGAAGGGATTGATGTTCCAACAGCACACAAATTGGTGTTTGATAACCCTTCTCATGATGAAACTAGTCACCATCCCTTGGTTTTGAAGGTGACTAAGTTTCTTTGTGGGGGTTTCACTATTGGAATGGGCTTGTCACATGTTGTTTGTGATGGGTTTGGTGCCTCTCAAATTTTTAGAGCCTTGGTTGAACTTGCAAGTGGAAAAAGTGAGCCCTCAGTGAAACCTGTGTGGGAAAGGGAGAGACTAATGGGGACACTTCTTAAGGAACCACTCCAATTTCCCGTAGATGAGACTTCAATGGCAATTTCACCATTTTGGCCAACTAAGGAGATTTCACATGAATGCTTTAGCATAAATGGTAAGAGCATACAAAGACTCAAAATGAAACTGATGAAGGAGAGTGACAATGTGAAGGAAAGCTTCACAACTCTTGAAACACTTGGTGCCTATGTTTGGAGGTCAAAGGCTAAAGCTTTGGAATTGAACACTGATGGAAAAACTTTGTTGAGTTTAGCAGTAGGGGTGAGACATCTATTGGATCCACCTTTGCCTGAAGGGTATTATGGTAATGCTTTTGTTGGTGCAAATATGGTGCTAACAATGAAAGAACTTAATGAAAGGCCACTCTCAGAGGTAGTGAAGCTCATCAAGGAGAGCAAAAAGCTTTCTTTTAACAATGAATACATAAAGAACTCAATCAACATGTTGGAGACAATGAGAAAAACGAACATTAAGATTGAAGGAACAGGTGTGTCTATGGTATTAACTGATTGGAGGCAACTTGGTTTGTTGGAAGAAGTGGATTTTGGATGGAAGGCTTCAGTGAATATAGTTCCAGTGCCATGGAACATGTTTGGCTATGTGGACTTGTGTCTTTTCTTGCCTCCTAGTAACTTGGATCCCTCAATGAAGGGAGGAGTTAGGGTCTTTGTATCCCTCCCTAAAGCTTCTATGCCTAAGTTCAGGGAGGAGATGGAGGCCCTTAGGCTTATGAGATTTGATGAAGGTAGCACCTAA 1512 0.3975 MSSSRTNLEKKRLNGHYFKKHSKIQVKNIKPNKVCHLFVINTILIPWQNLKKPLSLDMKNVVIIKPSKPTPSNILPLSTIDSDPVLNILCQTIYVYQANIDSSKGQVDPACVIKEAISKALVYYYPLAGKIITFDDGKLGINCNADGVPFLEANANCELSSLHYLEGIDVPTAHKLVFDNPSHDETSHHPLVLKVTKFLCGGFTIGMGLSHVVCDGFGASQIFRALVELASGKSEPSVKPVWERERLMGTLLKEPLQFPVDETSMAISPFWPTKEISHECFSINGKSIQRLKMKLMKESDNVKESFTTLETLGAYVWRSKAKALELNTDGKTLLSLAVGVRHLLDPPLPEGYYGNAFVGANMVLTMKELNERPLSEVVKLIKESKKLSFNNEYIKNSINMLETMRKTNIKIEGTGVSMVLTDWRQLGLLEEVDFGWKASVNIVPVPWNMFGYVDLCLFLPPSNLDPSMKGGVRVFVSLPKASMPKFREEMEALRLMRFDEGST* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1852 503 Gene3D - 272 490 IPR023213 -
Apr10g1852 503 Gene3D - 52 256 IPR023213 -
Apr10g1852 503 PANTHER ACYL TRANSFERASE 4 49 494 - -
Apr10g1852 503 Pfam Transferase family 57 492 - -
Apr10g1852 503 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 49 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1852 Apr-Chr10 31546472 31550045 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1852 54 488 Monolignol Biosynthesis Gene Families AT5G48930 26.726 7.19e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1852 K20240 - gmx:100801843 784.252