Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1845 ATGGAAACTAAAAGTGCAGATCTGTCGATTGTTTCTGGAATGATTGGCAATGACAAATTAATATGTCAATATGTAAGAAAAGTCACCAAAAGGGGTATTTGGCTTGGAGATAATCCCTTCAATCACATCACTTCTATCATAACAGTTCAGATTGTTTTTATGTTCATTATTGGTAGAATTAGTTATTTCTTGCTAAAGCCTTGTCATCAGACCCTGCTCATTGCACAGATTGTGGCTGGAATCATATTAGGTCCTTTATTGCTGGGTACAAAGGATTCATATTATGAGCTGATATTTCCAACAGCAAGCAGATTAACACTCACAACATTTGCAGAATTTGGCATGATAATTCATTTCTTTAAAGTAGGAGTGCAAATAAATCCCATGCAGCACTTGAAGATTGAGAAACAAGCAGTGGTAACTGGTCTAATAGGCCACATGTCTGCAATGGCACTTGGCACTTCAGTTTTCAACATTGTTAGAGTAATGCAACCTTTGGCAATTGATGACCCTGGAACTTATGCTTTGGTGGTAATTAGTTCAGTGTCAGCATTTCCTGTTATATGTGGTTTCCTCACTGAGATGAACATTCTCAATTCGGAGATTGGAAGAATGGCATTATCCACTTCTATAGTTAGTGAAGCATCACAAGTTGCAGGACAACCTTCTTTCCTTGTTGCTTTTTGGTTTGGTTTGGTGTTACCTGATGGTCCTCCTTTAGGTTCTGTGCTAGCACAAAGGCTTGACACTATTGGTTCTACTTTGATTGTTCCAGCCTTTTGTACTATTAGTGGGCTAAGGACAAGTGTTCCTTCGTTATCAAAATCAAAATCAAGTGTAGCTGTTATCTTTATTTCAGTGTTTATAGGAAAGTTTGTGGGCACCCTTTTACCCTCACTTCACTTCCGAATGGAATTCTGGGATTCTTTTGCACTGGCTCTAATCATGTGTTGCAAAGGCCTTGTAGATATTTCTCTTCTCAACATATTATTAAACTCTAAGGCAATAGGAGAACTATCTTTCACTCTTGCTATATATATTATGGTGGCTGTAACAGGGTTTGCAACTTTAGTTGTTTATTACATATACGATCCTTCAAGGAGGTATAGAGCCTATATTAGAAAATCAATTAGGGACTCTCAGCAGGACCTTGATCTCAAAATACTTGTCTGCATCCATAATGAAGAAAATGTGTATCCAATCATCAACCTTCTTCAAGCCTCCAACCCCACAGAGGCTACACCCCTCTCAATCTTTGCCTTACATCTCATGGAGCTCTCAGGAAGGGCAACTTCAGTTCTTACCAAAACTGAGAACACCAATAAGTCATCACAACACATATACAATGTCTTTGATCAATTTGAGCAGCATAACAAAGGGTGTATCACATTGCAATGCTTCACTGCAATTGCACCATATGCAAGCATGCATGATGACATATGTTACATAGCTATGGACACCAAATCTAACATTGTGATCATGCCATTCCATAAGCAATGGTCCATTGATGGAAATGTTGAGTTCTCCAATTCTTCAATTAGGACACTAAACCAAAAAGTTCTAAAGAAAGCACCTTGTTCAGTTGGAATTTTGATTGACCGAAGCCAATTGAGTGGCAAACTTTTAGTGATCTACGAAAAGCTATTTTGTGAAGTTGCTATGGTCTTCTTAGGTGGTGGTGATGACCAAGAAGCACTAGCTTATAGTTTGCGCATGGCTCAACATCCACATGTGAAACTAACAGTTTTTTGGATAAGGGTTAAAATGCAAGTGAACCAAAGGAATGTGAGGAACACTTACATTGACTTGATGGAGTATATGCATTATCATACTAGTAATAAAGGCAAAGTGACATTCAAGGAAGAGATTGTGGATGATGGAGCAGGAACAGCACAAGTTATTAGAACCATGGAGGGACATTATAGCATGGTCATTGTGGGTAGACATCATATGGCAGATAATCCATGTACATTAGGCTTAACAGAATGGTGTGAACTTCCTGAGCTTGGACCACTTGGAAACCTCTTAGCTACGTCAGATTTTACTTTTTCAGTTTTGGTGGTGCAACAACAACCCCCCTTTAGCTATGAATTACGGTATATTAGGTGA 2109 0.3864 METKSADLSIVSGMIGNDKLICQYVRKVTKRGIWLGDNPFNHITSIITVQIVFMFIIGRISYFLLKPCHQTLLIAQIVAGIILGPLLLGTKDSYYELIFPTASRLTLTTFAEFGMIIHFFKVGVQINPMQHLKIEKQAVVTGLIGHMSAMALGTSVFNIVRVMQPLAIDDPGTYALVVISSVSAFPVICGFLTEMNILNSEIGRMALSTSIVSEASQVAGQPSFLVAFWFGLVLPDGPPLGSVLAQRLDTIGSTLIVPAFCTISGLRTSVPSLSKSKSSVAVIFISVFIGKFVGTLLPSLHFRMEFWDSFALALIMCCKGLVDISLLNILLNSKAIGELSFTLAIYIMVAVTGFATLVVYYIYDPSRRYRAYIRKSIRDSQQDLDLKILVCIHNEENVYPIINLLQASNPTEATPLSIFALHLMELSGRATSVLTKTENTNKSSQHIYNVFDQFEQHNKGCITLQCFTAIAPYASMHDDICYIAMDTKSNIVIMPFHKQWSIDGNVEFSNSSIRTLNQKVLKKAPCSVGILIDRSQLSGKLLVIYEKLFCEVAMVFLGGGDDQEALAYSLRMAQHPHVKLTVFWIRVKMQVNQRNVRNTYIDLMEYMHYHTSNKGKVTFKEEIVDDGAGTAQVIRTMEGHYSMVIVGRHHMADNPCTLGLTEWCELPELGPLGNLLATSDFTFSVLVVQQQPPFSYELRYIR* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1845 702 Pfam Sodium/hydrogen exchanger family 52 216 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr10g1845 702 Gene3D - 45 215 IPR038770 -
Apr10g1845 702 Gene3D - 216 371 IPR038770 -
Apr10g1845 702 PANTHER CATION/H + ANTIPORTER 33 215 - -
Apr10g1845 702 PANTHER CATION/H + ANTIPORTER 215 692 - -
Apr10g1845 702 PANTHER CATION/H(+) ANTIPORTER 14 215 692 - -
Apr10g1845 702 PANTHER CATION/H(+) ANTIPORTER 14 33 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1845 Apr-Chr10 31512817 31516383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1845 212 691 Antiporter Super Family AT1G06970 42.105 1.75e-128 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1845 - - aprc:113851213 1373.22