Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1843 ATGGCTGAAAACGGGGAAGAGAAATTGCTGGCTGTGGCGCGGCACATAGCAAAGACGCTGGGCCACAACAACCACAACATAGCCGATGATATCCTCCAAATATTCTCCAACTTCGATGGTAGATTCTCCAAAGAGAAGCTATCTGACGATGGTGCGGGGAATGATCCCATGGGTTGCGCTGCACTCGAACAGAAACTTAACTCTATTGACCGTCGGATCTTGTGCCACGTGTCTTCTGATCAATCTATCTGGTCTAACTCCGCTGATTCCGCCTCATTTCTCGCTGCCGTCGACGAACTCGTTGCTGCTGTCGAAGACTGGAGTCCTCTGGCTAGTGACAAGGAGGTAGGCGCGTGCCTCCTACGCGCCGATGAGATGCTTCAACAGGCTATGTTCCGCGCGGAGGATGAGTTCCGCTCTCTCATGGAGCTCGGCGGCGATTTGTACGACTTGACTCGGAACAACGGCGGCTCAACTCGGAACGACGACTCGCCGTTTGACTCGGATGACGACGAAGAAGAAGAAAACGACGGCGGCGGCAATGACCTGATTCCGGTGGCAAAGCCGGTGAGTGATTACGACGTAGTGATCGACTCGCTGCCGCCGGGGACAGTGAACGATCTCCGCGAGATTGCGAAGCGCATGGTGGCGGCGGGGTTCGGGAAAGAGTGTTCGCATGTGTATGGCGTTTGCCGGAGGGAGTTCTTGGAGGAGAGCATGTCGAGGTTAGGTTTGCAGAAACTGAGTATTTCGGAGGTTCACAAGATGCCCTGGCAAGAGCTCGAAGATGAGATTGAGCGATGGATGAAGGCGTCCAAAGTCGCTCTCAAGATTCTGTTCCCTAGCGAGCGGCGTCTCTGCGATCGTGTCTTCTCCGGCCTCTCCTCCTCCTCCGCCGATCTCTCCTTCATGGAGGTCTGCCGCGGATCGGCGATTCAGCTGCTGAACTTCGCGGACGCCGTCGCGATCGGGAGCCGCTCGCCGGAACGGTTGTTCAGAGTCCTCGACGTGTTCGAGACGATGCGTGACCTGATTCCCGAATTCGAATTGTTGTTCTCCGATCAGTACTGCGCGTTCCTCGTTAACGAAGCCGTCACGATTTGGAAGAGGTTGGGGGAAGCGATTAGGGGAATTTTCATGGAATTGGAGAATCTAATTAGCCGAGATCCGGTGAAGGCGGCGGTTCCCGGGGGCGGACTTCATCCGATCACACGCTATGTGATGAACTATCTCCGCGCCGCATGTAGGTCGCGGCAAACCCTAGAACTAGTTTTCCAAGACAATGAGGTTTCATTGAAGGATTACCCTCAGCTTGAGGATAGGTTGCAATTGCAATTGCAACCTAACTCCTCGTTTTCTATTCAAATCACTTGGATTATGGACATATTAGAACGCAATTTGGAAGCGAAATCTAAAATCTACAAGGACCCTGCTTTGTGCTCTGTTTTCATGATGAATAATGGGAGGTACATTGTTCAGAAGGCTAAAGATAGTGAATTGGGAACACTTTTAGGCGATGATTGGATTCGAAAACACACTGGCAAAGTCCGGCAATGCCATGTGAGCTATCAAAGAAGCTCCTGGAACAAGTTGCTCGGGTTTCTCAAAGTGGAGAATAATGGGTCCATGTCAATGGCGGCAAAACCTATGAAGGAGAAGCTCAAGTTGTTCAACCATCATTTTGAGGAGATTTGCAGGGTGCAGTCTCAGTGGTTAGTCTTTGATGAACAGCTCAGGGAAGAAATTCGGATTTCGCTGGAAAAGATATTGTTGCCTGCATATGCAAGCTTCATTGGAAGGTTCCACAATGTCCCGGAACTTGGCAAGCATGCTGATAAGTATGTCAAGTTTGGAATGGAGGACATTGAAGCTCGGCTTAATGATTTGTTTCAGGGAAGCAGTGGATCAAATGGGGGCCGAAAGTGA 1926 0.5119 MAENGEEKLLAVARHIAKTLGHNNHNIADDILQIFSNFDGRFSKEKLSDDGAGNDPMGCAALEQKLNSIDRRILCHVSSDQSIWSNSADSASFLAAVDELVAAVEDWSPLASDKEVGACLLRADEMLQQAMFRAEDEFRSLMELGGDLYDLTRNNGGSTRNDDSPFDSDDDEEEENDGGGNDLIPVAKPVSDYDVVIDSLPPGTVNDLREIAKRMVAAGFGKECSHVYGVCRREFLEESMSRLGLQKLSISEVHKMPWQELEDEIERWMKASKVALKILFPSERRLCDRVFSGLSSSSADLSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRVLDVFETMRDLIPEFELLFSDQYCAFLVNEAVTIWKRLGEAIRGIFMELENLISRDPVKAAVPGGGLHPITRYVMNYLRAACRSRQTLELVFQDNEVSLKDYPQLEDRLQLQLQPNSSFSIQITWIMDILERNLEAKSKIYKDPALCSVFMMNNGRYIVQKAKDSELGTLLGDDWIRKHTGKVRQCHVSYQRSSWNKLLGFLKVENNGSMSMAAKPMKEKLKLFNHHFEEICRVQSQWLVFDEQLREEIRISLEKILLPAYASFIGRFHNVPELGKHADKYVKFGMEDIEARLNDLFQGSSGSNGGRK* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1843 641 MobiDBLite consensus disorder prediction 152 185 - -
Apr10g1843 641 MobiDBLite consensus disorder prediction 165 179 - -
Apr10g1843 641 SUPERFAMILY Cullin repeat-like 84 630 IPR016159 -
Apr10g1843 641 Gene3D Exocyst complex component Exo70 80 639 - -
Apr10g1843 641 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 631 IPR004140 GO:0000145|GO:0006887
Apr10g1843 641 Pfam Exo70 exocyst complex subunit 266 628 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr10g1843 641 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1843 Apr-Chr10 31493216 31496119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1843 1 641 EXO70 exocyst subunit family AT5G58430 67.341 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1843 K07195 - gmx:100803694 910.598