Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1834 ATGTCGAAGGTGGTTTGTGTCACCGGAGCCAGCGGCGCCATCGGATCATGGGTGGTCCTCCTCCTCCTCCAGCGTGGCTACACCGTTCATGCCACCGTCCAAGATCTTAAGGATGAAAAAGAGACGAAGCACTTGGAGGAAATGGAAGGGGCGAAGGGTCATCTGCGTCTTTTTGAGATGGACCTTCTAGACATGGATTCAATAACCGCAGCCGTAAAGGGTTGTTCTGGGGTTATTCACCTTGCATGTCCTAATATTATTGGTCAAGTCAAAGACCCAGAGAAGGAGATATTGGAACCGGCGATAAAAGGGACGGTGAATGTGCTGAAGGCGGCGAAGGAAGCAGGGGTGGAGAGAGTGGTGGCGACGTCGTCGATCTCCGCCATTATGCCCAGTCCTAACTGGCCAGCTGATAAGATTAAAGGAGAAGATTGTTGGACAGACCTTGAATACTGCAAGCAAAAGGGGTTGTACTATCCCATGGCAAAGACTCTAGCGGAGAAAGCAGGTTGGGATTTTGCTAAAGAGACTGGTTTCGATGTGGTGATGATAAACCCTGGTACAGCTTTGGGCCCTCTTCTTACTCCGAGAATCAATTCCAGCATGGCCGTGCTTGTTAGTGTTCTCAAAGGTGGCAAAGAAACATACGAGGACTTCTTTATGGGAACGGCTCACTTCAAAGATATAGCAATGGCACATATTTTGGTATTGGAGACCAAGAAAGCAACCGGAAGACACCTGTGTGTGGAAGCCATTCGTCACTTTGGTGATATAGTGGCAATGATAGCTGAGTTATACCCTGAATATGATGTGGCTAAGTTGCCAAATGATACCCAACCAGGGTTGTTGAGAGCAAAGGATGCATCAAAGAAGCTGATTGATTTAGGTCTAGAGTTCACTCCTGCTGAACAAATCATTAAGGATGCAGTGGAGAGTTTGAAGAGGCAGGGTTATGTCTAA 960 0.4771 MSKVVCVTGASGAIGSWVVLLLLQRGYTVHATVQDLKDEKETKHLEEMEGAKGHLRLFEMDLLDMDSITAAVKGCSGVIHLACPNIIGQVKDPEKEILEPAIKGTVNVLKAAKEAGVERVVATSSISAIMPSPNWPADKIKGEDCWTDLEYCKQKGLYYPMAKTLAEKAGWDFAKETGFDVVMINPGTALGPLLTPRINSSMAVLVSVLKGGKETYEDFFMGTAHFKDIAMAHILVLETKKATGRHLCVEAIRHFGDIVAMIAELYPEYDVAKLPNDTQPGLLRAKDASKKLIDLGLEFTPAEQIIKDAVESLKRQGYV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1834 319 Pfam NAD dependent epimerase/dehydratase family 5 246 IPR001509 -
Apr10g1834 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 314 IPR036291 -
Apr10g1834 319 CDD FR_SDR_e 5 297 - -
Apr10g1834 319 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Apr10g1834 319 Gene3D - 1 319 - -
Apr10g1834 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1834 Apr-Chr10 31424571 31426591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1834 3 319 Monolignol Biosynthesis Gene Families AT5G58490 65.615 6.56e-164 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1834 - - gmx:100806281 588.186