Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1833 ATGGGGGGTACCTCACCTTGTGCTTCTTGCAAGTTGTTGAGACGCCGTTGCACCAAGGAATGCATCTTTGCTCCTTACTTTCCTTCCGATGACCCCCGCAAATTTGCCATTGTGCATAAGGTCTTTGGTGCTAGCAATGTCAGCAAAATGCTACAGGAGCTTCCAATTCAACAAAGAGCAGATGCTGTAAGCAGTTTAGTTTACGAGGCAAATGCAAGAGTGAGAGACCCTGTTTATGGATGTGTTGGAGCCATATCATACCTACAAAGCCAGGTTTCACAATTGCAAATGCAGCTTGCAGTGGCTCAGGCAGAGATTTTTTGCATGCAGATGCAGCAACAAGAACCAACCTTAGCCACCCAAATAGACCAAGATCACAAATCATTGCTCTTATCTGAAAACAACAACTACGAAATCCTTCCTTATTATCTTAACTTTCCTTCCTCTTCTTCCTCTTCTTCCAATGTATTCCATGACTCTGAGTCTCTTAAGAGAGAATCTTTTTGGACCTAA 513 0.4327 MGGTSPCASCKLLRRRCTKECIFAPYFPSDDPRKFAIVHKVFGASNVSKMLQELPIQQRADAVSSLVYEANARVRDPVYGCVGAISYLQSQVSQLQMQLAVAQAEIFCMQMQQQEPTLATQIDQDHKSLLLSENNNYEILPYYLNFPSSSSSSSNVFHDSESLKRESFWT* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1833 170 Coils Coil 85 105 - -
Apr10g1833 170 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 2 167 - -
Apr10g1833 170 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Apr10g1833 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 167 - -
Apr10g1833 170 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1833 Apr-Chr10 31414781 31415775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1833 3 170 AS2 family AT2G30130 64.737 1.35e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr10g1833 LOB 2.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1833 - - gmx:100819419 277.715