Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1824 ATGGCCGGAGCGTTGGAGTGCTGGTCGAGCCGCGGCAACGGCGACGAAGACATGGTGGAGCAAGTCCTCATGCGAAAACCACAAGACCCAACAACACCTCAACCCCCCAAAGACTCTTCCATCGTCCACAAGAAGTTTCAGAAGCTCACGCGCAATGTTTCCGAAGCCATTGCGTCACTTAAGAACTCTCTCAACATTAACGTTAGTTTTGAATCTTCCAAACCCGATACTTCTCGTAACCTTGTTTGGGGAACCGTTGTTCGTAACCTCACTCAGCTTTACCCTGGTAGCCAACTTCCCGAGAAGCTCGTTTGCAACGTTCGCAAGCACTACGATTCCTTGCCTCTCAGTTATTCTCAAGCGGGTTTTGATGTGAAAGATGTGTTTCTTCACATAAAGTTGATGGAACAAGCTTTGGAAGATGAGCAGGCTGCGATTTTGATTCAAGAGGAGGGTGACGGTGAGATTCAGCTTCAGGGGACTTTGTTCAAGTTGACATTTGCTTGCAACTCTCCAATTTCGTGGCCTGCAATGTCAGCTGTGTTGGATAGTTACTCCATCTGCTGCAAAAAGATTCAGATCTTTGAGAAGAAAGGTTTCACCCTTGGCATTGTTCTTCTTCTTGTTCTATCTGGGACTGGGCAAGAAAAGTTGGTTAGGACCCGGGTTGAAAGTGCTCTCAAGATTGCCATGAAGAGGCCCAAAGCCAGTGCTGTGAAGCTTCCGTTCGGGCTTTGTGGATGTCAAGAGGAGAACTCCAGTGGTAGAGAACTTGGAGAGATTGAAGAAGATGTTGGTGATACATACTGTGGAAACATGTTTGAGAATTTGAGCCAAAAGATTCAGCTTCAGATGCCCTTGCCTAGTTCATCTTTTCTTGTATCGGTAGATGAATGGCAGACTATTCAGTCAGGTGGGGATGAGATCGAAAAGTGGTTGTTGGACTCGGATAGTCTTGAGTTTTCAGAACAGATTGGACCAAATTCATTTAAGGGGACCTACATGGGGAAAAGGGTTGGCATTGAGAAGCTTAAAGGGTGTGAGAAAGGGAACTCTTATGAGTTTGAGCTCAAGAAAGATCTGCTAGCACTGATGACTTGTGGGCATAAAAATATTTTGCAGTTTTGTGGTGTTTGCGTAGATGACAATCATGGGTTATGTGTAGTGACGAAATTCATGGAAGGCGGATCTGTTCATGACTTAATGTCAAAGAACAAGAAGGTTCCAAGTAAGGATATCGTAAGAATTGCAGTTGATGTGGCCGAGGGCATCAAATTTATGAATGATCATGGTGTTGCATACCGAGACCTTAATATACAGAGGGTTTTGTTGGATAATCATGGGAATGCTTGCTTGGGCGATATGGGTATAGTCACTGCCTGCAAGAGTGTTGGAGAGGCAATGGACTACGAAACTGATGGTTATCGGTGGCTTGCTCCAGAGATAATTGCCGGCGATCCAGAGAGTGTCACAGAGACATGGATGAGTAATGTTTATAGTTTTGGCATGGTAATTTGGGAGATGGTAACTGGTGAGGCAGCATACTCTGCTTATTCACCTGTGCAAGCAGCAGTTGGCATTGCTGCTTGTGGCCTTAGACCTGAGATCCCAAAGGACTGTCCTCAAACTCTTAAGTCTCTTATGACAAAGTGTTGGAACAACACCCCTTCAAAACGTCCTCAGTTCTCTGAAATTTTGGCAATATTGCTGCGACCAAACAACAACAGTAGGTAA 1734 0.4521 MAGALECWSSRGNGDEDMVEQVLMRKPQDPTTPQPPKDSSIVHKKFQKLTRNVSEAIASLKNSLNINVSFESSKPDTSRNLVWGTVVRNLTQLYPGSQLPEKLVCNVRKHYDSLPLSYSQAGFDVKDVFLHIKLMEQALEDEQAAILIQEEGDGEIQLQGTLFKLTFACNSPISWPAMSAVLDSYSICCKKIQIFEKKGFTLGIVLLLVLSGTGQEKLVRTRVESALKIAMKRPKASAVKLPFGLCGCQEENSSGRELGEIEEDVGDTYCGNMFENLSQKIQLQMPLPSSSFLVSVDEWQTIQSGGDEIEKWLLDSDSLEFSEQIGPNSFKGTYMGKRVGIEKLKGCEKGNSYEFELKKDLLALMTCGHKNILQFCGVCVDDNHGLCVVTKFMEGGSVHDLMSKNKKVPSKDIVRIAVDVAEGIKFMNDHGVAYRDLNIQRVLLDNHGNACLGDMGIVTACKSVGEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYSAYSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNNTPSKRPQFSEILAILLRPNNNSR* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1824 577 Pfam Protein tyrosine and serine/threonine kinase 352 568 IPR001245 GO:0004672|GO:0006468
Apr10g1824 577 ProSiteProfiles Protein kinase domain profile. 319 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1824 577 PRINTS Tyrosine kinase catalytic domain signature 390 403 IPR001245 GO:0004672|GO:0006468
Apr10g1824 577 PRINTS Tyrosine kinase catalytic domain signature 426 444 IPR001245 GO:0004672|GO:0006468
Apr10g1824 577 PRINTS Tyrosine kinase catalytic domain signature 496 518 IPR001245 GO:0004672|GO:0006468
Apr10g1824 577 PRINTS Tyrosine kinase catalytic domain signature 540 562 IPR001245 GO:0004672|GO:0006468
Apr10g1824 577 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 573 - -
Apr10g1824 577 MobiDBLite consensus disorder prediction 1 40 - -
Apr10g1824 577 PANTHER SERINE-THREONINE PROTEIN KINASE 1 573 - -
Apr10g1824 577 Gene3D Transferase(Phosphotransferase) domain 1 312 574 - -
Apr10g1824 577 SUPERFAMILY Protein kinase-like (PK-like) 297 569 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1824 Apr-Chr10 31325055 31328925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1824 302 569 MAP Kinase Kinase Kinase AT2G17700 33.333 1.26e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Apr10g1824 PK_Tyr_Ser-Thr 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1824 - - gmx:100819097 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1824 10 31325055 31328925 Apr9g1150 9 20926890 20931458 PCT