Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1820 ATGTCCATGGCTGGGGAACAAGGTGATAGTTGCTCCTCCATCACCATACCCCTTTTGGGTGAAGAAAAAGTGCACCAAGTGAATGACTCAAATATTGAAGCTTTGGTGGCCAAGACTTGTGATTCACACACCCCTTATGTGGGTAACACCTCCTTTTACAAGACATGCTTCCATCTTATTAATGCCCTCTCAGGAGTTGGTATTATATCGATGCCTTATGCACTGGCATCTGGGGGATGGTTAAGCATATCACTGCTATTTGTGATTGCAATTGCTTGCTGTTACACTGGCATGTTGGTCAAAAGATGCATGGATATGGACCCTGATATAAGAACCTTCCCTGACATAGGTCAACGCGCATTTGGAGACAAAGGGAGGCTAATTGTGTCAATTGCGATGAATTCTGAGCTCTACCTTGTTGTAACAGGTTTTCTGATTTTAGAGGGTGATAATTTAAACAAACTGGTACCAAATGTGCAACTTGACCTCGCCGGGTCAACAATTAGTGGAACAACAATTTTTGCCATGGTTGCTGCCCTTGTTATTTTGCCTACTGTTTTGTTAGAGGATTTGAGTTTGCTATCTTATGTCTCTGCTAGTGGAGCTTTGGCTTCTTCCATTTTTCTCCTCTCTCTATTTTGGAATGGCACCATTGATGGCACAGGATTTCATGCAAAGGGAACATTTTTCAGATTGAGTGGAATACCTGCTGCAGTTAGTTTATATGCCTTTTGTTACAGTGCTCATCCAATTCTTCCCACTCTCTACCATTCTATGAGAAACAAAAGCCAGTTCTCAAGGGTTCTCTTTGTATGCTTTTCTGTATGCACACTTGGTTATGCAGCAGCAGGTTTTTTGGGCTACTTAATGTTTGGGGAAGAGGTTGACTCACAGGTGACTTTGAACCTCCCAACAGGGAAATTCAGTTCACAAGTAGCAATATACACTACCTTGGTCAATCCCATAGCCAAATATGCATTGATGCTTAGTCCAGTCATAAATGCTGTAAAAAATAAGGTTTCATGCTATAACAACAAAAGGCTCACACATATACTTGTTAGTACCTTAATGCTCATTAGTACTCTTATTGTAGCTGTGGCCATTCCCTTATATGGATACCTCATGTCATTTATTGGGGCATTACTAAGCGTCTCAGCTTCAATTATAGTACCATCAGTGTGCTATTTGAAGATTTCAGAAGCTTACAAGAGATTTGGGTCTGAAATGATAATAAACTATTCAATAATAGTAATGGGTGTTACTATTGCTGTTGTGGGTACATATACATCTCTGTTAGATATAATTCACAATTTGTAA 1317 0.4009 MSMAGEQGDSCSSITIPLLGEEKVHQVNDSNIEALVAKTCDSHTPYVGNTSFYKTCFHLINALSGVGIISMPYALASGGWLSISLLFVIAIACCYTGMLVKRCMDMDPDIRTFPDIGQRAFGDKGRLIVSIAMNSELYLVVTGFLILEGDNLNKLVPNVQLDLAGSTISGTTIFAMVAALVILPTVLLEDLSLLSYVSASGALASSIFLLSLFWNGTIDGTGFHAKGTFFRLSGIPAAVSLYAFCYSAHPILPTLYHSMRNKSQFSRVLFVCFSVCTLGYAAAGFLGYLMFGEEVDSQVTLNLPTGKFSSQVAIYTTLVNPIAKYALMLSPVINAVKNKVSCYNNKRLTHILVSTLMLISTLIVAVAIPLYGYLMSFIGALLSVSASIIVPSVCYLKISEAYKRFGSEMIINYSIIVMGVTIAVVGTYTSLLDIIHNL* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1820 438 Pfam Transmembrane amino acid transporter protein 49 430 IPR013057 -
Apr10g1820 438 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 3 436 - -
Apr10g1820 438 PANTHER OS05G0424000 PROTEIN-RELATED 3 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1820 Apr-Chr10 31286238 31290861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1820 47 435 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.359 7.91e-153 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1820 K15015 - gmx:100784690 753.051