Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1819 ATGGAAGAACCGTGGAGATTCAACCTCTGCCGCGTGTTTGTTGTGGTGGTCTCTTTATTCTCGTTCTCCATGGAACATATTTGGTGTTCCACTCTCAACAGTGAAGGGTTGGCGATGCAAAAGATGAGGGAGAGAATGGTGAGAGATCCATTGGGGGCTTTATCAAGTTGGAATGGTGAAGAAGGAGTGGTTGATCCTTGCTCTTGGTTCGGAGTAGAGTGCTCCCACGGCAATGTTGTTTCCTTGAATTTAAAAGATCTGTGTCTGCACGGAACACTAGGACCCGAAATTGGGAAGCTGGTTCATATAAAATCAATCATATTGCGTAACAATTATTTCTTTGGAGACATCCCCAAGGAAATACTGCAACTAGAGGAATTGGAAGTTCTTGACTTAGGATTTAACAACTTTAGCGGACCATTTCCATCTGAAGACCTTGGCAACAATCCTTCCCTAACTACCCTTTTATTGGACAATAATAACTATCTTGCCAACTTAGCTCCAGAAGTGTATGAGCTCAAGAAGTTTTCTGAATTGCATGTGCATGAAGAACAACTAACTGGTGCCACCTCTAGAGAAGCATGTGTTAGCATATCTAATATATGGCGCATTGACCGGCGTGGGGATATAGCATACAGAAGGCAACTTCTCCAAGTAGCACCTAACTCACCCAAAACTAAGAGGGTTGATGACAAAGAGACTCTTTCACCATCACCATCACCCTTTTCCTCTTTACTATCACCAGTTTCTGAGCCTTTTCCCCCATCACCATCACCATCAGAAAGTCCCTCAGATTCACCAACATCTCCAGAAGTTTCCCCTTCACCTTCTCCATCTCTTTCTAGTGTCTTTTTCACTCTTTCACCTTCACCTATGGTAGCACCAACTCCAGCAAATCCACCTATTGTTGTGTCCAAACCACCACATTCCAACTGGGTTTCAACACCTTCTCCTGCTTCATCTTTAAACCAAGGGAATTCAAACAGTTCAAAACCAAAGCAACATCTTGTGATTATTTGGTCCACAGTTGGAGGCTTCTTCCTGATTTTGGTGTCATGCATTGCTTTTGTTTGCATCAGAAGCAGCAAGGTTGTAGCTGTAAAACCTTGGGCCACAGGGTTGAGTGGCCAGTTGCAGAAAGCATTTGTAACAGGTGTTCCAAGTCTAAAACGAACAGAACTTGAAGCAGCTTGTGAAGACTTCAGCAACATTATTGGTTCTCTGCCAAATGGGACTATTTATAAAGGAACTCTCTCTAGTGGAGTTGAAATAGCTGTAGCATGCTCTACAGTGACTTCATCCAAAAATTGGTCAAAACATGTCGAAGCTAAATTCAGAAAGAAGATCGAGATGCTATCAAGAGTAAACCACAAGAATTTTGTGAATCTTATTGGACATTGTGAAGAGAATAATCCATTCACAAGGATGATGGTTTTTGAGTATGTTCCAAATGGATCACTATTTGAACATCTACACATTAGAGAAGCAGAACAACTAGACTGGGGAATGAGAATGAGGATAGCTATGGGAATAGCCTACTGTTTAGAGCACTTGCATCAGCTAACACCACCCATTGCCCACAGAAACCTCCAATCTTCCTCTATATACCTGACTGAAGATTATGCTGCTAAATTATCAGATCTTAGTTTCTGGAATGACATAGTTGATACAAAGAAGGGTTCTGAAGCCACACAAGTTGCAGAAACAACTTCAGCTTGTATAAAATCTAATATTTATAGCTTTGGAGTAATATTGTTTGAATTGATTACTGGTAGAGTTCCCTATGCAGTAGACAATGGCTTAGTTACAGATTGGGCAGCAGAATATATAAGGGAGCAACCCTTGAGAGAGTTGGTAGATACAAGCCTTAACTCTTTGAGAGCAGATGAAATTGAAAAATGGTCACAAGTGATCAACAGCTGTGTTCATCCAGATCCCGGAAAAAGGCCAACTATGAGAGAGGTTGCTGCTAAGTTGAAGGAAATCACTGCTATGGGACCTGACGGAGCAACTCCCAAACCATCCCCTCTTTGGTGGGCAGAAATAGAAATTATGTCCACTGACTTAAGTTCAGACTTTAATCCATAA 2088 0.4167 MEEPWRFNLCRVFVVVVSLFSFSMEHIWCSTLNSEGLAMQKMRERMVRDPLGALSSWNGEEGVVDPCSWFGVECSHGNVVSLNLKDLCLHGTLGPEIGKLVHIKSIILRNNYFFGDIPKEILQLEELEVLDLGFNNFSGPFPSEDLGNNPSLTTLLLDNNNYLANLAPEVYELKKFSELHVHEEQLTGATSREACVSISNIWRIDRRGDIAYRRQLLQVAPNSPKTKRVDDKETLSPSPSPFSSLLSPVSEPFPPSPSPSESPSDSPTSPEVSPSPSPSLSSVFFTLSPSPMVAPTPANPPIVVSKPPHSNWVSTPSPASSLNQGNSNSSKPKQHLVIIWSTVGGFFLILVSCIAFVCIRSSKVVAVKPWATGLSGQLQKAFVTGVPSLKRTELEAACEDFSNIIGSLPNGTIYKGTLSSGVEIAVACSTVTSSKNWSKHVEAKFRKKIEMLSRVNHKNFVNLIGHCEENNPFTRMMVFEYVPNGSLFEHLHIREAEQLDWGMRMRIAMGIAYCLEHLHQLTPPIAHRNLQSSSIYLTEDYAAKLSDLSFWNDIVDTKKGSEATQVAETTSACIKSNIYSFGVILFELITGRVPYAVDNGLVTDWAAEYIREQPLRELVDTSLNSLRADEIEKWSQVINSCVHPDPGKRPTMREVAAKLKEITAMGPDGATPKPSPLWWAEIEIMSTDLSSDFNP* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1819 695 MobiDBLite consensus disorder prediction 308 331 - -
Apr10g1819 695 Pfam Leucine rich repeat N-terminal domain 33 75 IPR013210 -
Apr10g1819 695 PANTHER PROTEIN MALE DISCOVERER 2 1 688 - -
Apr10g1819 695 Gene3D Phosphorylase Kinase; domain 1 374 481 - -
Apr10g1819 695 MobiDBLite consensus disorder prediction 307 331 - -
Apr10g1819 695 Pfam Protein tyrosine and serine/threonine kinase 402 659 IPR001245 GO:0004672|GO:0006468
Apr10g1819 695 MobiDBLite consensus disorder prediction 222 277 - -
Apr10g1819 695 ProSiteProfiles Protein kinase domain profile. 399 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1819 695 Gene3D Transferase(Phosphotransferase) domain 1 482 667 - -
Apr10g1819 695 SUPERFAMILY Protein kinase-like (PK-like) 382 659 IPR011009 -
Apr10g1819 695 MobiDBLite consensus disorder prediction 248 274 - -
Apr10g1819 695 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 688 - -
Apr10g1819 695 Gene3D Ribonuclease Inhibitor 31 229 IPR032675 -
Apr10g1819 695 SUPERFAMILY L domain-like 45 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1819 Apr-Chr10 31275966 31281218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1819 277 662 Receptor kinase-like Gene Family AT4G02010 29.929 2.92e-41 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Apr10g1819 PK_Tyr_Ser-Thr 4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1819 - - gmx:100814122 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1819 10 31275966 31281218 Apr9g1147 9 20883197 20888505 PCT