Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1811 ATGTCCTCTGAACATCACTACCATTTTATTAATCTAAAGGGTTCAAACTTTCACTCCTATGGCCAAGGTCTGTTCCTATTACTATGGTTTATTGCCATTCTCATTTTTGTCCCTTCATTTTTCCTATGTGTCCTCTTATGTCACCGTCGCTTCTCACAACAACATAACTCCGCAGCCACCACAACGCTCTCTCCCCTCCATGATCATCAAAAGGTAAGAGTTGATTTCACCAACAACACTTTGTTTTCATCTACAACTACCAAGGTTGATGAAGGGTTTGAGAAGAAAGAATGTTGTATATGTTTGAGTCTTTTCCAAGATGGTGAAAGGTTGAAGGTGTTAACCCAATGTCAACATGCCTACCATTCTGAGTGCTTGGATATGTGGCTTCGTGCACATCCTAGTTGCCCTCTTTGCAGGGCCTCACTCAATGTTAGTAATTCTCTGATGAAGAAATCTGATGTTTAA 468 0.406 MSSEHHYHFINLKGSNFHSYGQGLFLLLWFIAILIFVPSFFLCVLLCHRRFSQQHNSAATTTLSPLHDHQKVRVDFTNNTLFSSTTTKVDEGFEKKECCICLSLFQDGERLKVLTQCQHAYHSECLDMWLRAHPSCPLCRASLNVSNSLMKKSDV* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1811 155 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Apr10g1811 155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 147 IPR013083 -
Apr10g1811 155 SMART ring_2 98 139 IPR001841 -
Apr10g1811 155 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 148 - -
Apr10g1811 155 Pfam Ring finger domain 96 140 IPR001841 -
Apr10g1811 155 SUPERFAMILY RING/U-box 97 146 - -
Apr10g1811 155 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 6 148 IPR044675 -
Apr10g1811 155 SMART FANCL_C_2 94 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1811 Apr-Chr10 31167704 31168171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1811 24 141 C3H Transcription Factor Family AT5G17600 32.061 2.42e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1811 - - gmx:102667569 191.815