Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1810 ATGCCAACCCAATCTGACTCATCCAACAACCCCATCAACACGTTGACCCAAATGTTTCAGAACATTTTCTCAGACAACAGTAACATCATGCTTGCAGCTATTGTTTCTTTGCTTCTTGTTATCCTCTTTGTTCTTCTTCTCCACCTCTATGCCAAATGGTTCTTGGCCCAGGCACAAGCTCAGGCCCGACGGCGCCGGCGACGACGAACGACGGTGACCGTCTCCGACGTCCTTGGCCCTGCAAGGTTCCACCATTTCCATAGCTTCAACATACAAGACTCACCCTTTTCCAGTTCTCACACCAAAGGGCTTGACTCATCCATCATTAGATCAATTCCACTCTTCATTTATGAAGAGGGTGGTAATGGTACTGGTGATGATGAAAAGGGTAGTATTGGTAAGAAGAAGAAGGTTGAAGACGAAGTTGAATGTGTGATTTGTTTGAGTGCTTTTGAGGATGGCGAAATGGGAAGGTGTTTGCCAAAGTGTGGCCATGGTTTTCATGTTGAGTGCATTGACATGTGGTTGAGTTCACATTCCAATTGCCCAATCTGTAGAGCTCCGATTGTAGTTGGTGTTGTTGAGAACGATTCTCGTATGGTTTCAATTGATGGAGATGAATATGATGGTTCTGATTTGGTTGAGATTGTGATTGATGATGCTCCAAGTTCTGAGGTTAGAGAGAGTGAGCATGAAAATATTGATAATGGAAGAAGGGTAAGTGTTTCTGTGTCAGAAACTTCATCTTCTTTGTTTGTGTGCTCTTTGGAGAGAATGCTTAGCAAAGTTTTCCCACCTTCTAATGTAAATGAATTACACGCTTGA 825 0.4339 MPTQSDSSNNPINTLTQMFQNIFSDNSNIMLAAIVSLLLVILFVLLLHLYAKWFLAQAQAQARRRRRRRTTVTVSDVLGPARFHHFHSFNIQDSPFSSSHTKGLDSSIIRSIPLFIYEEGGNGTGDDEKGSIGKKKKVEDEVECVICLSAFEDGEMGRCLPKCGHGFHVECIDMWLSSHSNCPICRAPIVVGVVENDSRMVSIDGDEYDGSDLVEIVIDDAPSSEVRESEHENIDNGRRVSVSVSETSSSLFVCSLERMLSKVFPPSNVNELHA* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1810 274 CDD RING-H2_EL5_like 143 186 - -
Apr10g1810 274 ProSiteProfiles Zinc finger RING-type profile. 144 186 IPR001841 -
Apr10g1810 274 Pfam Ring finger domain 143 186 IPR001841 -
Apr10g1810 274 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 269 IPR044675 -
Apr10g1810 274 PANTHER - 7 269 - -
Apr10g1810 274 SUPERFAMILY RING/U-box 135 191 - -
Apr10g1810 274 SMART ring_2 144 185 IPR001841 -
Apr10g1810 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 191 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1810 Apr-Chr10 31160964 31161801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1810 21 187 Rapid Response to Elicitors AT3G16720 35.928 3.43e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1810 - - pvu:PHAVU_006G070000g 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1810 10 31160964 31161801 Apr9g1142 9 20817415 20818429 PCT