Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1805 ATGGAGGATCGTTACTCTGCTGCCGTTGATCTTCATGGAGAACCAAAACAGGCTTTTTTTGGTATATTTGATGGGCATGGGGGAACAGAAGCTTCGGAGTTTGCTGCACATAACTTAGAAAAGAATGTGTTGGATGAAGTCATTGGGAGAGATGAGAGTGACATTGAGGAGGCAGTGAAGCATGGATACCTCAACACAGATTCTGATTTCTTGAAGGAGGATCTTAATGGTGGCTCTTGCTGTGTAACAGCGTTGATTAGGAATGGTAACCTTGTTGTGTCCAATGTTGGTGATTGTCGTGCTGTCATTAGCAGAGGGGGTGTTGCAGAAGCCCTCACATCTGATCACAAGCCTTCAAGGGAAGATGAAAGGGACAGAATTGAGACTCAGGGTGGCTATGTTGATATGTGTCGTGGTGTTTGGAGGATCCAGGGATCATTGGCTGTTTCTAGAGGAATTGGAGATAGACACCTTAAACAATGGGTGATAGCAGAACCTGAGACCAAAGTTCTCAGAATTGAAACTCAACATGACTTGTTAATCTTAGCTTCAGATGGATTATGGGAAAAGGTTAGTAACCAGGAAGCAGTGGATATTGCTCGTCCTTTATGTGTAGAGAGCAATAGACAACAACCATTGGTGGCTTGCAAAAAGCTTGTTGATTTATCTGTGTCACGAGGCTCTGTGGATGATATAAGTGTTATGATTATCAAATTGCAAAATTATATTTGA 732 0.4249 MEDRYSAAVDLHGEPKQAFFGIFDGHGGTEASEFAAHNLEKNVLDEVIGRDESDIEEAVKHGYLNTDSDFLKEDLNGGSCCVTALIRNGNLVVSNVGDCRAVISRGGVAEALTSDHKPSREDERDRIETQGGYVDMCRGVWRIQGSLAVSRGIGDRHLKQWVIAEPETKVLRIETQHDLLILASDGLWEKVSNQEAVDIARPLCVESNRQQPLVACKKLVDLSVSRGSVDDISVMIIKLQNYI* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1805 243 CDD PP2Cc 1 239 IPR001932 -
Apr10g1805 243 SMART PP2C_4 1 237 IPR001932 -
Apr10g1805 243 Pfam Protein phosphatase 2C 12 232 IPR001932 -
Apr10g1805 243 ProSitePatterns PPM-type phosphatase domain signature. 19 27 IPR000222 GO:0043169
Apr10g1805 243 Gene3D - 1 242 IPR036457 -
Apr10g1805 243 SUPERFAMILY PP2C-like 1 241 IPR036457 -
Apr10g1805 243 ProSiteProfiles PPM-type phosphatase domain profile. 1 239 IPR001932 -
Apr10g1805 243 PANTHER PROTEIN PHOSPHATASE 2C 1 242 IPR015655 GO:0004722|GO:0006470
Apr10g1805 243 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1805 Apr-Chr10 31107464 31109135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1805 1 243 PP2C-type Phosphatase Gene Family AT2G30020 72.245 2.02e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1805 K17506 - gmx:100779913 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1805 10 31107464 31109135 Apr9g1137 9 20756957 20759726 PCT