Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1795 ATGAAGGTCTCAATTTCTTCTCGTGCATCATCCCCATCATCCTCATCCACCAACAATTTAGACCCAACTATGTGCAACTCCAAAAGCACCACTTCAGGGTGTCTCACAGCCATCTTGCGCAAGATACTTTGCTCTGATGGCCTTCCAAGAGACCCATCTGACCAAAAAACAGAATTTGATTCATTAGATGCATTGGTGAGTAGCAAAGATCACCACTTGGAGGCTAAGCATAGTGTTGAAGGTGCGGCTACTACTACTATTACTACTACTCCTGGAATAGTAGCAAGGTTAATGGGTTTGGAATCAATAGAGATACCTTGTGTACCAAAACCAAGTTCACTTTCACGTAGCAGATCCATGAATTCTGTGGACTACTTGGGAGAATGCAATGGAATGGAGGGTCATAAGAAGGTTAAGTCGACCTTGTCATTTAGAGAAGCTCCAACTTTTCTTTTGCATGAAAATGACAACTTTTTGGTATTTAATTTTGAAAATGGAGGTCAGAGTAGAGAATTCAAATCCAATGGGAGAAAAAGAGAAACGGGTTGTGCAGAATTGAAGCAGAAGGTGCTAAAAGAAAGAGGTGAATTGAGAGAAAACAAGAGTGAAAAGGTGAATGATGAGAAGGGGAAACACAGCAAAAAAAGGGTGTCTCCAAAGCCTTGTAGAAATGATGGTAAACTTCAAGAAATCACCAACAGTTCACATCCTTTAAAGGCTTTAAATGAAAAGCAGAAGTGTTTTGATTCTGAAGCAGTGAAATTGTCACACATCATCAACCGCAAGGAAGTTGTGGTTGGTGAAAAGCAGAAGAGAAAGAAAAGAAGGAAGAAGAAAACAATTTGTCACCCTGAAAACAAGATAGAAATTGAATGCAAGTCAGAAGATTCAAGCCCAGTTTCTGTCCTTGATTTTGAGCGTGAACCATGTGGAACAGTTGGTTTGAATTCAAGAAGAAAATTGTCACCAGAGCTTGAAAATGACCAGCACTTTCTTCAGCGTTCTGATGGTAACTTGATGATTGATGAGAGGAAGGTTAAGGCAATTGAGAACAACAAATATGAAGGATCAAAGAAAATAGCGAAGCATAGTCATGAGTACATAGGTGTTTGGGGTGAAGCTTGCGGAATAGTTGAAAATGAATTGGGTGCATCAAATCATGCATGGACTAATAAACAAGGTGATTTAGATGAAATTAGTGCAGATTTTGGGTCAGAAATTTTTGATCACTTGTTAAATGAGGTTGTGGAGCAACTTGTTTGCAGTCACTGA 1272 0.3939 MKVSISSRASSPSSSSTNNLDPTMCNSKSTTSGCLTAILRKILCSDGLPRDPSDQKTEFDSLDALVSSKDHHLEAKHSVEGAATTTITTTPGIVARLMGLESIEIPCVPKPSSLSRSRSMNSVDYLGECNGMEGHKKVKSTLSFREAPTFLLHENDNFLVFNFENGGQSREFKSNGRKRETGCAELKQKVLKERGELRENKSEKVNDEKGKHSKKRVSPKPCRNDGKLQEITNSSHPLKALNEKQKCFDSEAVKLSHIINRKEVVVGEKQKRKKRRKKKTICHPENKIEIECKSEDSSPVSVLDFEREPCGTVGLNSRRKLSPELENDQHFLQRSDGNLMIDERKVKAIENNKYEGSKKIAKHSHEYIGVWGEACGIVENELGASNHAWTNKQGDLDEISADFGSEIFDHLLNEVVEQLVCSH* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1795 423 MobiDBLite consensus disorder prediction 194 228 - -
Apr10g1795 423 MobiDBLite consensus disorder prediction 194 223 - -
Apr10g1795 423 MobiDBLite consensus disorder prediction 1 25 - -
Apr10g1795 423 Pfam DUF761-associated sequence motif 90 103 IPR032795 -
Apr10g1795 423 PANTHER - 5 421 - -
Apr10g1795 423 PANTHER OS05G0128300 PROTEIN 5 421 - -
Apr10g1795 423 Coils Coil 183 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1795 Apr-Chr10 30992140 30993535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1795 27 419 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 29.369 6.13e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1795 - - gmx:102660067 511.916