Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1792 ATGACACCCTTCACTCTCTCATTCTCTTTTGCCGCACTTTTCATATTAACCACCGTCAACGCCCTTGGCTCCGCCGCCACCACCGCCGTCACATACGGCACCGCCACCGTCTGCGGCGTTGTCGCCGGCGAGACAAATCACCACATCCAATGCTACCAAAACGGAAAACTCGTCCCCCTCACCCTTCCCAACGTTTCCTTTCAGGCGATCTCGGGTGGCCGGAGCTTCTTCTGCGGCATCCGGTCCGGCGGGTACAGCCTCCACTGTTGGGACACGAATGAACAAAACACATCGTTTTGTCCGAAAAGGTTGTTTCACAGTGACACGGTGCAGTTAACGGATGTAACCGTTGGTGATGCTCAGGTTTGTGCTAGAGAGGTGCAATCTGGTGTGGTGAGGTGTTGGAGAGGAAATGGTGGGGTGGTGTTTCCTTCACCTGGGGAAGGGTTAAGGTTTGGTAGCATCACTTCTGGGTGTGGTTTTTCATGTGGAGTGTTGAGGGAAAATGGAAAAGTTTTGTGTTGGGGTGATGAGGGTGCAAATGGGAATGGAAATGGTGGTGAGATTCAAAGAAAGTTTGAGAATTTGGGTATGTCTAGTTTGGTTGCTGGTGTGTCTCATGTGTGTGGTTTGACTCTTAATGGGGTTTTGGTTTGTAATGGGAACAATGGTTCTGGTCAACTTGGTGGTGGTGATTTTGGTTCTGCTATGGAGTTTTCAGGTTTTGCTTTAGGAGCTGATTTTACTTGTGGTATTAGGCGCAATAATGGGTTTGTTGTGTGTTGGGGTGGGTTTGATAGTGATGTGGTAAAGGGTGTTTCTTTTGAGTCAATTGTTGCTGGGTTGGATTTTGTTTGTGGGTTGACTACTAGGAATTTGTCTGTGCTTTGTTGGGGTCCTGGTTGGGGTGTTAAGCTTCATTTGCCTAATGAGGTTCCATTGGGAATGGTTCTTCCAGGTCCATGTGTTGAGGGTGGTTGTGGTTCTTGTGGTACATATCCTGATTCTGATGTTCTATGTCATGGCTCTGGGAGTATTTGCTATTCTTGTCAGACTCAGGTTCCACTTGCTGTGCCATTGTTGCCTCAATCACCACAAGTTCCAATTCAAGAATCTTATTCTTCAGGTGAAGGGAAAGACTTGAGGGAATTGTTGGCATTTTTTATTGTTGGATCAGTTGGGGCTTTTGCTGGTTTGTGTACTATTTTTTATTTGCTTTGGATTGGAGGTAGGAGATTCTTGAGGACTAAAGTTGATAATTCTGTGCAACCTACAAGCTCAGAATCTGATGCCTATGTGGATATAGTTCCCATGCCTAATTTTGGTTCCAATGGAACAACATTCAGATCTTTTTCTAGCAAAAGGCAAAGCTCAGGGAGATTGAGGAGACATAGGAGTGCTTCATCATCAAAGCATGTGGATAGGACTGAGAGTTTCTCATTGTGTGAACTCGCAATAGCCACCAGCAACTTCTCAGTGGAGAATAAGATAGGTGCTGGAAGCTTTGGGAGTGTTTACAAAGGGAAGTTAGCAGATGGTCGTGAAGTGGCCATAAAGAGAGGAGATACAAGCACCAAGAAGAAGAAATTTCAGGAGAAAGAAATTGCATTTGATTCTGAATTGGCATTGTTGTCCCGGCTCCACCACAAGCATTTGGTGAGGCTAATTGGGTTCTGTGAGGAGAATGATGAGAGGCTTTTGGTTTATGAGTACATGAGCAATGGATCACTCTATGACCATTTGCATGACAAGAATAACATTGAGAAAAGTAGTAGTATTTTGAATTCTTGGAAGATGAGAATCAAAATTGCATTGGATGCTGCTAGAGGGATTGAGTACATTCACAACTATGCAGTGCCACCCATTATTCACAGGGATATAAAGTCCTCAAATATACTTTTAGATTCAAATTGGAATGCTAGAGTTTCTGATTTTGGATTGTCATTAATTTGGCCTGAAACTGAGCAAGAATTGATGTCTACCAAAGCAGTTGGCACTGTTGGATACATAGATCCTGAGTACTATGTGTTGAATGTGCTAACCACAAAAAGTGATGTTTATGGTTTAGGAGTGGTGATGTTGGAGCTTCTAACAGGAAAAAGAGCAGTGTTCAAAACTGAAGAAGGGTCGAGTCCTATTGGGGTGGTGGAATACACAGGGCCAAAGATAGCATCAGGAGAGCTTTGGAGTGTGTTGGATTATAGAGTTGGACAACCAGAAGTGAATGAGGTTGAGTCTATTGAGATCATGGCTTACACTGCCATGCATTGTGTGAATTTGGAGGGAAAAGAGAGGCCTGACATGACTGACATAGTTGCTAACTTGGAGAGGGCATTGGCTTTTATTGAGGGCAGCCCTGGTAGCCTCTCTATAGCTTCATTCTCAGCACCTCTTGAATGA 2400 0.4442 MTPFTLSFSFAALFILTTVNALGSAATTAVTYGTATVCGVVAGETNHHIQCYQNGKLVPLTLPNVSFQAISGGRSFFCGIRSGGYSLHCWDTNEQNTSFCPKRLFHSDTVQLTDVTVGDAQVCAREVQSGVVRCWRGNGGVVFPSPGEGLRFGSITSGCGFSCGVLRENGKVLCWGDEGANGNGNGGEIQRKFENLGMSSLVAGVSHVCGLTLNGVLVCNGNNGSGQLGGGDFGSAMEFSGFALGADFTCGIRRNNGFVVCWGGFDSDVVKGVSFESIVAGLDFVCGLTTRNLSVLCWGPGWGVKLHLPNEVPLGMVLPGPCVEGGCGSCGTYPDSDVLCHGSGSICYSCQTQVPLAVPLLPQSPQVPIQESYSSGEGKDLRELLAFFIVGSVGAFAGLCTIFYLLWIGGRRFLRTKVDNSVQPTSSESDAYVDIVPMPNFGSNGTTFRSFSSKRQSSGRLRRHRSASSSKHVDRTESFSLCELAIATSNFSVENKIGAGSFGSVYKGKLADGREVAIKRGDTSTKKKKFQEKEIAFDSELALLSRLHHKHLVRLIGFCEENDERLLVYEYMSNGSLYDHLHDKNNIEKSSSILNSWKMRIKIALDAARGIEYIHNYAVPPIIHRDIKSSNILLDSNWNARVSDFGLSLIWPETEQELMSTKAVGTVGYIDPEYYVLNVLTTKSDVYGLGVVMLELLTGKRAVFKTEEGSSPIGVVEYTGPKIASGELWSVLDYRVGQPEVNEVESIEIMAYTAMHCVNLEGKERPDMTDIVANLERALAFIEGSPGSLSIASFSAPLE* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1792 799 SUPERFAMILY RCC1/BLIP-II 52 263 IPR009091 -
Apr10g1792 799 Gene3D Phosphorylase Kinase; domain 1 451 571 - -
Apr10g1792 799 CDD STKc_IRAK 497 777 - -
Apr10g1792 799 Gene3D - 66 301 IPR009091 -
Apr10g1792 799 ProSiteProfiles Protein kinase domain profile. 491 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1792 799 MobiDBLite consensus disorder prediction 446 470 - -
Apr10g1792 799 SUPERFAMILY Protein kinase-like (PK-like) 469 775 IPR011009 -
Apr10g1792 799 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 5 793 IPR044815 GO:0004674
Apr10g1792 799 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Apr10g1792 799 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 5 793 - -
Apr10g1792 799 Pfam Protein kinase domain 492 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1792 799 SMART serkin_6 491 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1792 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Apr10g1792 799 Gene3D Transferase(Phosphotransferase) domain 1 572 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1792 Apr-Chr10 30922246 30924645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1792 5 790 Receptor kinase-like Gene Family AT3G55950 52.703 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Apr10g1792 Pkinase 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1792 - - gmx:100776682 1241.48