Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1782 ATGCCAGCAATCTCCGCCAAGCGCAGACCAAAATCTCACGCGCCACCCCCTTCCTCACCCATCCGTAAATCGCCTCGCCGATGCGTCGCCGCATCCCCCAAGTCCGCCTCCACTGGAAACAAACTTGAGGCTGATGAAAACCAAGTCAACATCGTAGTTGCGAAACCCAAATTGAATCCCAAAGACGGTGAGCAATTGAAGACGGTGAAGTTGGCATTGCACTTATCTACTGCGCCATCTACGGTTGTGTGTCGTGAGGAGGAGCAGAGTGTGGTTTTAGGGTTCGTGAAGGGGTGCGTGGAGCACCAAAAGGCTGGGAGTTTGTACATATGTGGGTGTCCTGGAACGGGGAAATCGTTGTCTATGGAGAAAGTGAAAGAGCTTTTACTCAATTGGGCTACGGAGGCAGGTCTCCCCCTGCCAGATGTTTTATCTCTAAACTGTACATCCCTCGCCAATACGTCTGATATTTTCACTAAGATACTTGGGTTAAACAGAGAACGGGGTAAAAAGGTTACGGCCACACCCTTACAGCAACTTCAGAACATGTATTCTCAGAAACCTTCTATCAAGAACATGACGTTGATAATAGCTGATGAATTAGATTATCTGATAACCAAAGACAGAGCTGTGCTTCATGATCTTTTCATGCTCACCACTTTCCCGTTTTCTAGATGTATACTAATAGGTGTAGCGAATGCAATTGACCTAGCTGATCGATTTCTTCCAAGGCTTACATCATTAAATTGCAAGCCTATTGTTGTAAACTTTCGAGCTTACTCTAAAGATCAGATCCTCAAGATTCTTGAAGAAAGATTAAATGAACTTCCTTACACTGTATTCCAACATCAAGCACTGGAACTATGTGCTAGGAAAGTTGCTGCTGCTTCTGGAGATATGCGAAATGCTCTTTGTATATGCAGGAGTGCAATAGAGATTCTGGAAGCGGAAATTAGAGAATCTGCCTGCAATTTGAATACTTCATTGGAGGAGAAATCATCCTCTGAACACATTCTTGTAAGGATTGATCATATGGCTCTTGCCTTGTCCAAGACATATAGATCGCCGGTTGTGGATACAATACAGTCTCTGCCGCATCATCAACAGATTGTACTCTGCTCATCTATAAAACATTTTCGTGGAGCCAAGAAAGATACAATCCTTGGAGAGTTGTATAAATCATATATGGAGATATGCAAATCATCACTGATTCCCCCTGCAGGAATCTTAGAATTTTCAAATATGTGCAGAGTGCTAAATGACCAGGGGCTTATTAAACTAGGTCAAGCTCGAGAGGATAAATTGAAAAGAGTAACGCCTAAAGTAGATGAGGGTGATATTACTTTTGCATTACAGCTTCATGTGAGACTATTCATCCATATATTAAGGTGA 1392 0.4303 MPAISAKRRPKSHAPPPSSPIRKSPRRCVAASPKSASTGNKLEADENQVNIVVAKPKLNPKDGEQLKTVKLALHLSTAPSTVVCREEEQSVVLGFVKGCVEHQKAGSLYICGCPGTGKSLSMEKVKELLLNWATEAGLPLPDVLSLNCTSLANTSDIFTKILGLNRERGKKVTATPLQQLQNMYSQKPSIKNMTLIIADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTSLNCKPIVVNFRAYSKDQILKILEERLNELPYTVFQHQALELCARKVAAASGDMRNALCICRSAIEILEAEIRESACNLNTSLEEKSSSEHILVRIDHMALALSKTYRSPVVDTIQSLPHHQQIVLCSSIKHFRGAKKDTILGELYKSYMEICKSSLIPPAGILEFSNMCRVLNDQGLIKLGQAREDKLKRVTPKVDEGDITFALQLHVRLFIHILR* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1782 463 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 11 461 - -
Apr10g1782 463 Coils Coil 311 331 - -
Apr10g1782 463 PIRSF Cdc6 3 463 IPR016314 GO:0006270|GO:0051301
Apr10g1782 463 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 11 461 - -
Apr10g1782 463 MobiDBLite consensus disorder prediction 1 43 - -
Apr10g1782 463 CDD AAA 88 246 - -
Apr10g1782 463 Gene3D - 251 361 - -
Apr10g1782 463 Pfam CDC6, C terminal winged helix domain 372 450 IPR015163 -
Apr10g1782 463 CDD Cdc6_C 365 447 IPR015163 -
Apr10g1782 463 SUPERFAMILY "Winged helix" DNA-binding domain 357 452 IPR036390 -
Apr10g1782 463 Pfam AAA lid domain 280 316 IPR041083 -
Apr10g1782 463 SMART Cdc6_C_2 372 451 IPR015163 -
Apr10g1782 463 Gene3D - 362 446 IPR036388 -
Apr10g1782 463 Gene3D - 63 250 IPR027417 -
Apr10g1782 463 Pfam AAA domain 103 220 IPR003593 -
Apr10g1782 463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 320 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1782 18 462 Core DNA Replication Machinery Family AT2G29680 63.158 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1782 K02213 - gmx:100791200 746.888