Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1759 ATGAAGAAAACACCAGGCATCAGTTTGCATCAATCTAGACAAAGAAAAAGGGATGTTGGTTTCCATGATAATGGTGTAGGCAATGGCACACAAAGGAATGGTGTTAAGAATCATACTGGCATGACATATTTCAAGTCTGCTTTCAAGAGGGTTTTTACCTTGTTTCTCTCTGGGAAAAGAAAAACAGCCTCAGAAGGTGTTGAAAGTGAAGACAGAAAGAATACACACAAAGTTAGAGGGGTATCATCTTCTACAGATTTATCATCTGATAGTTTCCAGAGTTCATCAAAAGGGAAGTTTTCTCATTCCTCTGCATCATCATCTGCCACTGCAAGTAGTCAGCTTGGAATGGGAAACTTCTCCTTTGAGGAAATTTACAAGGCAACAGCAAAGTTCTCTCCAGATAATAAGATTGGTGAAGGTGGGTTTGGAACGGTGTATAAGGGAAAGCTTAATGATGGATCCCTTGTGGCTATAAAGCGTGCCAAGAAGGATATACAGAATAAGAACTTGGCTGAGTTCAAGAATGAAATAAACACCTTATCAAAAATTGAGCACCTGAACCTTGTGAGGTGGTATGGATATTTGGAGCATGGAGATGAAAAGATTATTGTTGTTGAATATGTTAATAATGGAACTCTTCAGGAACATCTACATGGTACACGGGGAAATGGACTAGAAATTGGTCAGCGTCTAGACATAGCAGTTGATGTTGCTCATGCAATTACATACCTTCATATGTACACAGATCATCCAATTATTCATAGAGACATCAAAGCATCAAATATCTTAATCACTGACAACTTAAGGGCCAAAGTGGCAGACTTCGGTTTCGCGCGGTTGGGTGCACTAGACCCAAATGCAACCCATATTTCAACTCAAATTAAAGGAACAGCTGGTTACATGGATCCTGATTACATGAGAACACAGCATCTTTCTGAAAAGAGTGATGTTTATTCATTTGGCGTGTTGCTTGTTGAAATGATGACAGGGCGGCATCCAGTTGAACCAAAGAGACCTCTCAGTGAGAGAGTTACAATTAAATGGGCAATGCAAATGTTGAAACAAGGAGAAATTGTGATTGCCATGGATCCAAGACTGAGGAGAAATCCAGCCTCAAACAAGGCAGTGGAGAAGGTTCTGAAGCTAGCTTTCCAATGTCTTGCACCGGTGCGACGATTACGGCCATCCATGAAGAGTTGTGCAGAGGTTCTGTGGGATATCCGTAAGGATTTTAGAGACAAAACCTCTTCTCATTCTCCTCATGGTTCTCACCATTCTGGAGATTTTCCTCAAAGAGATGTTAGGAATAATAGACACATGACATACAAAGGCTATAAATATGTATCTGCATAA 1356 0.4034 MKKTPGISLHQSRQRKRDVGFHDNGVGNGTQRNGVKNHTGMTYFKSAFKRVFTLFLSGKRKTASEGVESEDRKNTHKVRGVSSSTDLSSDSFQSSSKGKFSHSSASSSATASSQLGMGNFSFEEIYKATAKFSPDNKIGEGGFGTVYKGKLNDGSLVAIKRAKKDIQNKNLAEFKNEINTLSKIEHLNLVRWYGYLEHGDEKIIVVEYVNNGTLQEHLHGTRGNGLEIGQRLDIAVDVAHAITYLHMYTDHPIIHRDIKASNILITDNLRAKVADFGFARLGALDPNATHISTQIKGTAGYMDPDYMRTQHLSEKSDVYSFGVLLVEMMTGRHPVEPKRPLSERVTIKWAMQMLKQGEIVIAMDPRLRRNPASNKAVEKVLKLAFQCLAPVRRLRPSMKSCAEVLWDIRKDFRDKTSSHSPHGSHHSGDFPQRDVRNNRHMTYKGYKYVSA* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1759 451 Pfam Protein tyrosine and serine/threonine kinase 135 405 IPR001245 GO:0004672|GO:0006468
Apr10g1759 451 MobiDBLite consensus disorder prediction 63 113 - -
Apr10g1759 451 MobiDBLite consensus disorder prediction 1 37 - -
Apr10g1759 451 SUPERFAMILY Protein kinase-like (PK-like) 109 407 IPR011009 -
Apr10g1759 451 PANTHER OS01G0253100 PROTEIN 1 444 IPR045271 GO:0004714|GO:0006468
Apr10g1759 451 Gene3D Transferase(Phosphotransferase) domain 1 209 426 - -
Apr10g1759 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Apr10g1759 451 CDD STKc_IRAK 138 405 - -
Apr10g1759 451 MobiDBLite consensus disorder prediction 80 113 - -
Apr10g1759 451 ProSiteProfiles Protein kinase domain profile. 132 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1759 451 MobiDBLite consensus disorder prediction 63 79 - -
Apr10g1759 451 SMART serkin_6 132 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1759 451 MobiDBLite consensus disorder prediction 415 436 - -
Apr10g1759 451 ProSitePatterns Protein kinases ATP-binding region signature. 138 164 IPR017441 GO:0005524
Apr10g1759 451 Gene3D Phosphorylase Kinase; domain 1 91 208 - -
Apr10g1759 451 PANTHER OS02G0821400 PROTEIN 1 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1759 Apr-Chr10 30622025 30626608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1759 94 409 Receptor kinase-like Gene Family AT3G46290 39.873 1.43e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Apr10g1759 PK_Tyr_Ser-Thr 2.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1759 - - gmx:100815871 708.368