Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1733 ATGGAGACCCCGGTTGAAGTTAAACCTACTCTTATTGCGTCGGGGTTCTTAGAAGACTTGTCTGAGACTTGCAAGATGGGTTCTCCAAATGGAAGACCAATGCATAAATCTGATGATGAAGTTCCTTTTGGCTCCGAAGTAGATTTTCACTCGTCAGAATCTATACTGGTGGATGTCCATGGATCACGTGCTGGAGAATCTCAAAGTGCTCGTGGTAAAATGTTGGGGGTTGCTATTTACAGGAGCATACAAATTGTAGTTTTCTCTAACAGGCTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTACAGAAATTGACTGGTCATCATGGATGGGTCTTTGCTATGAGTTTATTGGGTATTATGCCTCTGGCGGAGCGTTTAGGTTATGCTACAGAGCAGCTGGCATTTTTCACTGGAGATACTGTTGGGGGCCTTTTAAATGCTACATTTGGAAATGCAACAGAATTAATCATCTCAATATATGCACTGAAAAGTGGAATGACTCGGGTTGTCCAGCTCTCGTTGTTGGGTTCTATTTTGTCGAATATGTTGCTGGTACTTGGATGTGCATTCTTAAGTGGTGGGATTGTTTTTCATAAGAAGGAACAAGTGTTTAACAAGGCAACTGCTGCTGTAAACTCAGGATTATTGCTGATGGCAGTCATGGGCATACTTTTTCCTGCTGTTCTACACTACACACACACTGAGGTTCATGTTGGGAAGTCAGAGTTATTACTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACCTATTTTTTCAGTTAAAAGGTCAAAGAAGTCATTACATGTCTGTGAATGAGCAAGAGGGTCAGAATGGGAGCAATTCAAATGATGATGAATCTCCAGATATTTCTAAGTGGGAATCAATAATTTGGCTTTTGGTTATGACTTCTTGGATATCAATCTTGTCAGAATATTTGGTTGGCGCTTTAGAGGGAGCTTCCACTGCATGGAATATTCCAGTGACATTTATTAGTGTAATATTGCTTCCACTAGTGGGGAATGCAGCTGAACATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCTTAGGAGTAGCAATAGGGTCATCCACGCAGATATCTATGTTTGTGATACCATTTTGTGTTGTTATTGGCTGGATAACGGGGCACCCTATGGACTTAAACTTTCAACTTTTCGAGACTGCAGCACTATTTCTAACTGTTATAGTTGTAGCCTTCATGTTACAGGAAGGAACTGCAAATTACTTCAAAGGGCTAATGCTTGTTCTTTGCTATCTGATAGTAGCAGCTAGCTTCTATGTACATGTAGATTCCTCTCAATAG 1362 0.409 METPVEVKPTLIASGFLEDLSETCKMGSPNGRPMHKSDDEVPFGSEVDFHSSESILVDVHGSRAGESQSARGKMLGVAIYRSIQIVVFSNRLNLLMPFGPLAILVQKLTGHHGWVFAMSLLGIMPLAERLGYATEQLAFFTGDTVGGLLNATFGNATELIISIYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLSGGIVFHKKEQVFNKATAAVNSGLLLMAVMGILFPAVLHYTHTEVHVGKSELLLSRFSSCVMLVAYAAYLFFQLKGQRSHYMSVNEQEGQNGSNSNDDESPDISKWESIIWLLVMTSWISILSEYLVGALEGASTAWNIPVTFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVIGWITGHPMDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGLMLVLCYLIVAASFYVHVDSSQ* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1733 453 Pfam Sodium/calcium exchanger protein 303 444 IPR004837 GO:0016021|GO:0055085
Apr10g1733 453 Pfam Sodium/calcium exchanger protein 114 269 IPR004837 GO:0016021|GO:0055085
Apr10g1733 453 Gene3D - 290 447 IPR044880 -
Apr10g1733 453 Gene3D - 141 280 IPR044880 -
Apr10g1733 453 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 29 452 IPR004713 GO:0006812|GO:0008324|GO:0016021
Apr10g1733 453 TIGRFAM caca2: calcium/proton exchanger 82 445 - -
Apr10g1733 453 TIGRFAM cax: calcium/proton exchanger 96 446 IPR004798 GO:0006816|GO:0015369
Apr10g1733 453 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 29 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1733 Apr-Chr10 30213215 30219609 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1733 60 453 Antiporters AT1G55730 72.589 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1733 K07300 - gmx:100799276 791.186