Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1731 ATGCCGGCGGCGTTCAACCTCGCCGTTCTCCCCGCCGGAAGGCCACTTCATTTCCCCTCCTCCGGCGACCGATCCACCACATTGCCACGCTGGACCTCGATCCGAGCCGTCGCGGCGGAAGCGATTGAAACGCGGCGGTCGGCGGCGAGCCTCTACGAAGTGCTGCGAATCGAGCAAGACGCGTCGCTGACGGAGATCAAATCGGCTTACCGGAGCCTGGCGAAGCTCTACCACCCCGACGCAGCGGTGCGGCGGTCGACGGAGAGTGACGACGGAGACTTCATCGAGATACGGAACGCGTACGAGACGCTGTCGGATCCGTCGGCAAGAGCGATGTACGATCTGTCGCTGAAGGCGGCGTTCGGCCGGAGACGCCGCCGGATTCCGACGCCGTTGAGTCGAAACCGGTCTTCGGGGTATTACTCGAGCCGAAGATGGGAAACGGACCAATGCTGGTAG 459 0.6383 MPAAFNLAVLPAGRPLHFPSSGDRSTTLPRWTSIRAVAAEAIETRRSAASLYEVLRIEQDASLTEIKSAYRSLAKLYHPDAAVRRSTESDDGDFIEIRNAYETLSDPSARAMYDLSLKAAFGRRRRRIPTPLSRNRSSGYYSSRRWETDQCW* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1731 152 SMART dnaj_3 49 109 IPR001623 -
Apr10g1731 152 CDD DnaJ 52 106 IPR001623 -
Apr10g1731 152 PRINTS DnaJ domain signature 52 70 IPR001623 -
Apr10g1731 152 PRINTS DnaJ domain signature 70 85 IPR001623 -
Apr10g1731 152 PRINTS DnaJ domain signature 89 109 IPR001623 -
Apr10g1731 152 Pfam DnaJ domain 51 114 IPR001623 -
Apr10g1731 152 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 9 152 - -
Apr10g1731 152 Gene3D DnaJ domain 36 130 IPR036869 -
Apr10g1731 152 SUPERFAMILY Chaperone J-domain 47 122 IPR036869 -
Apr10g1731 152 ProSitePatterns Nt-dnaJ domain signature. 94 113 IPR018253 -
Apr10g1731 152 ProSiteProfiles dnaJ domain profile. 50 117 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1731 Apr-Chr10 30204191 30204825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1731 41 114 C2H2 Transcription Factor Family AT1G74250 41.558 4.01e-09 52.4