Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1728 ATGAGCGATTCTGCATACAGAGTCGAAACCACACCGCGCCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGCACTTACCGCAAATCCGATCCTTTCAAGATCGGAAAGTGGAATTGGCATTTGTCGGTGGAGAAGAACAGGGTTTTGTTTGTTAAATTGTTCCCAGAAATATCCAATCTAACCAGAGAGAATCCCCCAATTGCATCTTTCATCGTTCGGGTGGTTAGTTCTGTTGGAGATCGCAAGGCCCTCACACATCCAGAAATAAAGGACAAAGTGCTCAAGAACAACGAAGATTTTGTTTGGGCAATTGAGGTTCCACTAACTGGGAAATTCATCATTGACGTTGAGTTCCTTGATTTGAAGACTTCATCTCCAAACGGTGGAGAACCTTGTTCCATCTGGGCTGAAGGATTTCCTCAACAAAGATCAAATGCAAAAGCCATAGAGTCTCTTGGTAGAATGCTAACAGAAGGCATCCACACAGACATCACCATCAATGCTTCTGACGGAAGTATAGGAGCTCATCGAGCTGTTCTTGCAGCTCGGTCACCTGTATTCCGCAGCATGTTCTCACATAATCTTCAGGAGAAAGAGTTGGCAACTATAAACATCTCAGACATGTCAATTGAAGCATGCCAAGCTTTTCTCAATTATCTTTATGGCATCATCAAGCATGAAGAATTTCTGACTCATAGGTTGGCCCTTCTACGTGCGGCTGACAAGTATGACATATCTGACTTGAGAGATGCATGCCATGAGAGTCTTCTAGAAGATATTGACACAAAAAATGTACTTGAGAGGCTCCAGAATGCATCTCTGTATCAGTTGATGAAACTGAAGATGAGTTGTATCAGATATCTGGTGAAGTTTGGTAAAATATATGAAATTCGGGATGATTTCAATACCTTCCTGCAAAATGCAGACAGGGATTTGATTGCTGAAGTCTTCCATGAAGTTCTTGATGCGTGGAAAGGATTCTGA 987 0.4235 MSDSAYRVETTPRLAQWRIENLASCTYRKSDPFKIGKWNWHLSVEKNRVLFVKLFPEISNLTRENPPIASFIVRVVSSVGDRKALTHPEIKDKVLKNNEDFVWAIEVPLTGKFIIDVEFLDLKTSSPNGGEPCSIWAEGFPQQRSNAKAIESLGRMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNLQEKELATINISDMSIEACQAFLNYLYGIIKHEEFLTHRLALLRAADKYDISDLRDACHESLLEDIDTKNVLERLQNASLYQLMKLKMSCIRYLVKFGKIYEIRDDFNTFLQNADRDLIAEVFHEVLDAWKGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1728 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 328 IPR044714 -
Apr10g1728 328 Gene3D Potassium Channel Kv1.1; Chain A 141 291 IPR011333 -
Apr10g1728 328 SUPERFAMILY POZ domain 149 259 IPR011333 -
Apr10g1728 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Apr10g1728 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Apr10g1728 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Apr10g1728 328 Pfam BTB/POZ domain 156 259 IPR000210 GO:0005515
Apr10g1728 328 PANTHER OS08G0495500 PROTEIN 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1728 Apr-Chr10 30163952 30166456 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Apr10g1728 BTB 1.3e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1728 K10523 - gmx:100790186 642.884