Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1726 ATGGCAGAAATTGCTGTGAATCTTGTAACTGACAAGTTGATTCCTTTACTGGAAAATGAAGTTAATCTGGCCAATGATGTGTGTAGCCAACTTGTGTTAGTGAAAGTTCAATTACGACTAATAAGAGCATACCTTAAAGATGCAGACTCAAAGGCAGAAATAGTGAAAACAGGTAATGTGGTGAAAGAGTGGGTGACTCAGATGAGAGAAGTTTCTTTTCACATTGAAGATGTCATTGATGAATATTTATACCTAGAGGATAATATGCTTCAAGGCAAGGACTTGTATGGTGTTGTTGGTATGATTGTGTGTAAAATTTATGACTTCCTTAGAAGTGTAATTGCCCATCATGGGATTTCAGCACAACTTGGTGAAATTGAAAAAAAACTAGAGGAACTCAACAAAGCAAAGGAAGCTTATGGATTGAGTTCATCAGCTTCAGAATCAAGTGGTGACACTACACTACATTACCTTCGACAGGGTGCCCTTTTTGTTGAGGATGATCAACTTGTGGGGGTTGAACCCACCAAGCAAGTACTAACCAATTGGTTGTTAGAGAATGGTAGTCGCACTGTCATTTCAGTGGTTGGCGATGGAGGATTTGGAAAAACAACCATTGTGAACAAGGTATTCAACGAGCAAAAGGAAAAACATTTTGATTGCTATGCATGGGTCACTGTGTCTCAATCACTTGGGGGGAAAAATCTCCTGAAGACTTTGAGAAGGAGATTCTATGAGGAGGCCAATGATAAAAATGCAACTAAGGAAATTAGTGACATGGACAATGATACTCTGGTAAGAAAATTACGGGAATACTTACATGAAAAGAGCTATATGATTGTGTTTGATGATGTGTGGGAGGAGAGCTTTTGGGGAGATGTAGAATATGCATTACCAAGAGGTAAGGGTAAGATAATCATCACCACAAGGTACAAGAAAGTTGCTGAGTTTTGTGGACGTTCTGGACCAATTCATGTCCATGACATGGAACCACTCAGTCCAGATGATGCTTGGAAGCTTTTTTGTAGTAAGGCATGTCCCGAAGGTTGTCCTGATGATTTGAAAGAATTGTCTTTGCAGTTTGTTAACAAGTGCAATGGATTGCCACTAGCAATTGTGGCTATTGCTGGTCTCCTCTCAACCAAAAACAAAAGTGTCTTAGAATGGAAAAAGGTATATGATAGCCTACGTTCAAAACTTTCAAGTGATCCCTATCTTAGTAGTTTACACCAAGTTTTATCTGAAAGTTACCAAGATCTTAGTTACAACCTTAAATCTTGCCTCTTATACTTTGGCCTTTTCCCTGAGGACTATTCAATTAGTTGTGTGAGACTTGTTAATTTGTGGATAGCAGAGGGTTTTGTAGAAAACAAAGAGAATGAAGGTCAAACACTAGAAGAAGTAGCAGAAGAATACTTGAGTGAGCTTATTGCAAGGAACTTGGTTAAAGTGGCTAAAAAATATTCGTATGGTAGGGTTAGAAATTGCCGGGTCCACGATTTAATGCATAACTTTATTCTCAAAAAGTGTGAGGAGCTAAAATTTTGTCAAGTGAAGAAAAGTGAGGAGTTTAAGTTACAAGAATGGACTCGGCGCTTATCAATTGACACATACATTGATGATGTTTCTTTGGAAAGAAGCGTTGCAAATTATAGACTAACAAGGTCTTGTTTTCATTTTAACATTACCCACGATATGCCAACTTCCATCTTTGAATCATTGTTCTCTAGCTTTAAGTTGTTGGTTAGATTAGACTGTGAAAATACACCCCTCAGTTATCTTCCTAAAGCAGTTGGTAACTTGCTCCATTTGAAATATTTGAACTTAAGGAATACTAGTGTTGAGATGATTCCAAAATTCATTGGCAAGTTGAAGAACCTTGAGACTTTGGATCTTAAAAATACTTATGTTCGTGAATTGCCCATAGAGATCAATAAACTTACTAAGTTGCGTCTTCTTTTGGTATATCACACTGATTCACATATCTTAGGTGTGAAATTAAAGGAAGGGATTGGTCATCTAAGGGCTTTACAGAAGTTACGCATGGTTGACGCAAGTGATGATGAAGATAGCATTATAAGAGAACTGCAGAATTTGAAGCAAATGAGGCATTTAGGCATATGTATGCTAAATAAAGAAAATGAAGAATTATTATGCAGTGCCATAGAGAGCATGACTAATCTATGCACATTGGCAATTAAGTTCATGAGTAAAATTGATCAAGTTCTTCACTTGGAATCATTAAGAGATCCTCCTCAACACCTCCAACGCATTTACTTATATGGGCGTTTAGAAAAATTGCCAAATTGGATTTCCAAGCTTAAAAATCTAGCCAGATTGCGGTTGTATCAATCAGGATTAATAGAAGATCCATTGCCTCTTCTTAAAGACTTGTCAACATTGTTGGAGTTTGATCTTTGGGAGTCCTATGAAGGTAATGAATTGTACTTTCAAAAGGGATGGTTTATGAATTTGAAAGTATTGAAAGTTGGCTTGTCCACGTTGGTAACATTTAAAATAGATGAAGGAGCAATGCCTCACCTTCAATTGTTGGAATTATCTATACGCCCTGAAACAGTGCAAGTGCCAACTCACATTCAGCAACTCATCAAATCATGA 2619 0.3734 MAEIAVNLVTDKLIPLLENEVNLANDVCSQLVLVKVQLRLIRAYLKDADSKAEIVKTGNVVKEWVTQMREVSFHIEDVIDEYLYLEDNMLQGKDLYGVVGMIVCKIYDFLRSVIAHHGISAQLGEIEKKLEELNKAKEAYGLSSSASESSGDTTLHYLRQGALFVEDDQLVGVEPTKQVLTNWLLENGSRTVISVVGDGGFGKTTIVNKVFNEQKEKHFDCYAWVTVSQSLGGKNLLKTLRRRFYEEANDKNATKEISDMDNDTLVRKLREYLHEKSYMIVFDDVWEESFWGDVEYALPRGKGKIIITTRYKKVAEFCGRSGPIHVHDMEPLSPDDAWKLFCSKACPEGCPDDLKELSLQFVNKCNGLPLAIVAIAGLLSTKNKSVLEWKKVYDSLRSKLSSDPYLSSLHQVLSESYQDLSYNLKSCLLYFGLFPEDYSISCVRLVNLWIAEGFVENKENEGQTLEEVAEEYLSELIARNLVKVAKKYSYGRVRNCRVHDLMHNFILKKCEELKFCQVKKSEEFKLQEWTRRLSIDTYIDDVSLERSVANYRLTRSCFHFNITHDMPTSIFESLFSSFKLLVRLDCENTPLSYLPKAVGNLLHLKYLNLRNTSVEMIPKFIGKLKNLETLDLKNTYVRELPIEINKLTKLRLLLVYHTDSHILGVKLKEGIGHLRALQKLRMVDASDDEDSIIRELQNLKQMRHLGICMLNKENEELLCSAIESMTNLCTLAIKFMSKIDQVLHLESLRDPPQHLQRIYLYGRLEKLPNWISKLKNLARLRLYQSGLIEDPLPLLKDLSTLLEFDLWESYEGNELYFQKGWFMNLKVLKVGLSTLVTFKIDEGAMPHLQLLELSIRPETVQVPTHIQQLIKS* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1726 872 Coils Coil 455 475 - -
Apr10g1726 872 Pfam Rx N-terminal domain 5 85 IPR041118 -
Apr10g1726 872 Gene3D - 4 120 - -
Apr10g1726 872 PANTHER - 34 864 - -
Apr10g1726 872 Gene3D Ribonuclease Inhibitor 548 871 IPR032675 -
Apr10g1726 872 CDD RX-CC_like 2 133 IPR038005 -
Apr10g1726 872 Gene3D - 422 509 IPR036388 -
Apr10g1726 872 Coils Coil 116 139 - -
Apr10g1726 872 PANTHER DISEASE RESISTANCE PROTEIN RP 34 864 IPR044974 GO:0006952
Apr10g1726 872 Gene3D - 151 323 IPR027417 -
Apr10g1726 872 Pfam NB-ARC domain 176 418 IPR002182 GO:0043531
Apr10g1726 872 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 431 IPR027417 -
Apr10g1726 872 Gene3D - 332 421 IPR042197 -
Apr10g1726 872 PRINTS Disease resistance protein signature 192 207 - -
Apr10g1726 872 PRINTS Disease resistance protein signature 272 286 - -
Apr10g1726 872 PRINTS Disease resistance protein signature 365 379 - -
Apr10g1726 872 PRINTS Disease resistance protein signature 622 638 - -
Apr10g1726 872 SUPERFAMILY L domain-like 497 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1726 Apr-Chr10 30144826 30147837 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1726 193 372 WRKY Transcription Factor Family AT5G45050 27.273 1.29e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1726 K13457 - zju:107414247 671.003