Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1724 ATGGCAGAAATTGCAGTGAACCTTGTGATTGACAAGTTAATCCCTTTACTTGGAGATGAGGTTAATCTTCTGAGAGGAGTGCCAAACCAACTTGAGTCAGTGAAAGGCCAGTTACAAATGATTCGTGCTTACTTAAAGGATGCAGATGCAAAAGCAGAAATGGGAAAAACCAATCTCTCAGTGAAAGAGTGGATCATGCAAATGAGACAAGTTTCATATCGTATTGAAGATGTGATTGATGAGTACTTGTTGCAAGTTCACAATAAGCTTCAAGACAATTGTGGGGTTGCTAGTGTCGTATGTAAAATTTGTGACTTGCTCAGATCTGTCATGTCCCGCCATAAGATTGCATCACAGATTGATGAGATCAGAGAGTCAATAGAGAGACTCAGCAGAGAAAAGGAAACTTTTGGGTTCAATCCATCTGCTTTGGAACCAAGGAGTGATATTACCACGCTGCATTATCTTCGACAGGGTGCCCTTTTCGTTGAGGATGATCAGCTTGTAGGGATTGACCACATCAAGCAAGTACTATCCAGTTGGTTGTCAGAAAAAGGTAGTCGCACTGTGATCTCAGTGGTAGGCGAAGGTGGTCATGGTAAGACAACGGTTGTGAACAAGGTATTCAATCAACAAAAGAAGGAAGGATCTTTTAATTGCTATGCCTGGATCACTGTATCCCGATTGCTCAGGGGAGAGAATCTATTGAAGACTTTGCTAAAGAGGTTTTATGAGGAGGCTGGCGACAAAGAATTAGTCAATGAAATTAGTGAAATGGACAGAAACGCTCTGGTAATAAAACTAAGAGAATGCCTACAAGGAGAGAGCTATTTGATTGTTTTTGATGATGTATGGGAAGAAAACTTTTGGGGAGATGTAGAACATGCATTACCAAGAAATAAAGGTATGATAATCATCACCACAAGAGATAAGAGAGTTGCTGAGTTTTGTGGAGGTCATGGACCAATTCACATCTATGACATGCAACCACTGAAACATGAGGATGCTTGGAACCTTTTTTGTCTGAAGGCTTTCCAAGAAGGTTGTCCCAAAGATTTGAAAGAATTGTCGAAAGAGTTTGTTAAGAAGTGCAATGGAGTGCCACTAGCAATTGTGGCTATTGCAAGTCTCCTCTCAACCAAAAATAAAAATGTATTCGAATGGCAAAGGGTATATGATAGCCTACGCTCAAAACTTTCAAGTGATCCCCATCTTAGCTGCGTCCATCAGGTTCTGTCTGAAAGTTACCAAGATCTTAGTTACCACCTCAAGTCATGCCTCTTATACTTTGGCCTTTTCCCTGAGGATTACTCGATCAGTTGTGTGAGGCTAATTAATTTGTGGATAGCAGAGGGTTTTGTAGAGAACAAAGAGAATGATGGTAAAAAACTTGAGGAAGTAGCAGAAGAATACTTAAATGAGCTTATTGCTAGGAACTTGGTTAAAGTGGTTAAAGTATTCTCCTATGACCGAGTTAGACGTTGTAGGGTCCATGATTTGTTGCATGATTTTATTCTCAGAAAGTGTGAGGAGCTGAACTTTTGTCAAGTGAAGAAAAGCCAGAGACTCGAGTTGCATGAGTGGACTCGGCGCTTGTTGATTGACGAATGTATTGATGATGATCCTGTGAAGAAAAGTGTTGCAAACTATGGGCTAGTTCGGTCTTGTTTTCTTTTTGGGATTGATCGATACACGCAAACGTCTGTGTTCGAATCATTGTTCTCAAGTTTTAAGCTCTTGGCAAGATTAGATTGTGAAGGTGCACCTCTTTATTATCTTCCTAAAGCAGTTGGAGACTTATTTCATTTGAAATATTTGAGTTTAAGGTCAACCCGCATCCGCAAGATTCCCAAGTTCATTGGTATGTTGCATAATCTTGAGACCCTAGACTTAAAACATACTAAGGTGCGTGAATTGCCACATGAGATTAACAGACTTGTTAAGTTGCGTCATCTTTTGGCATATCGCTTAGGTGTCGGTGTGAAATTCAAGAGAGGAATTAGACATTTAAGTTCACTGCAGAAGTTAAGAAAGGTTGATGCACGTGATAATGGGGATGTGATTATGAAAGAACTAAAGAATCTGAAGCAGATAAGGGATTTGGGCATTTATATACATAGAAAAGATGGGACATTATTATGCGATGCTATAGAGTGCATGGCTTATTTGAGGTCATTATCAATTAAAGCAGCTGAAGAAGAAGTTATTGACTTGGAATCATTAATTGTTTCTCCTCAGAGTCTCCAACGCCTTTACCTAGACGGGCGTTTGAGGAAGTTGCCAGATTGGGTTCCCAAACTTAAAAGTCTTGTAAAGTTGCGCTTGTATGGATCACAATTAACAGAAGATCCACTGCCTCTTATAAAAGACTTGTCATCACTGGTAGAGCTCCAACTTTATGAATCGTATAAAGGCCATGAGTTGTGTTTCCAAGAGGGATGGTTTATGAAAATGAAGGTATTGGTAGTTGAGCTTTCCACTTTGGTAACATTTAAAATAGAAGGAGGAGGAATGCCTTACCTTCAACTGTTGAAATTATATGGACGTCGCCCTGAAATGCTGCAGGTGCCAACTCATGTTCGACAAGTTATGAGATTCAGACGTTTTTAA 2610 0.3985 MAEIAVNLVIDKLIPLLGDEVNLLRGVPNQLESVKGQLQMIRAYLKDADAKAEMGKTNLSVKEWIMQMRQVSYRIEDVIDEYLLQVHNKLQDNCGVASVVCKICDLLRSVMSRHKIASQIDEIRESIERLSREKETFGFNPSALEPRSDITTLHYLRQGALFVEDDQLVGIDHIKQVLSSWLSEKGSRTVISVVGEGGHGKTTVVNKVFNQQKKEGSFNCYAWITVSRLLRGENLLKTLLKRFYEEAGDKELVNEISEMDRNALVIKLRECLQGESYLIVFDDVWEENFWGDVEHALPRNKGMIIITTRDKRVAEFCGGHGPIHIYDMQPLKHEDAWNLFCLKAFQEGCPKDLKELSKEFVKKCNGVPLAIVAIASLLSTKNKNVFEWQRVYDSLRSKLSSDPHLSCVHQVLSESYQDLSYHLKSCLLYFGLFPEDYSISCVRLINLWIAEGFVENKENDGKKLEEVAEEYLNELIARNLVKVVKVFSYDRVRRCRVHDLLHDFILRKCEELNFCQVKKSQRLELHEWTRRLLIDECIDDDPVKKSVANYGLVRSCFLFGIDRYTQTSVFESLFSSFKLLARLDCEGAPLYYLPKAVGDLFHLKYLSLRSTRIRKIPKFIGMLHNLETLDLKHTKVRELPHEINRLVKLRHLLAYRLGVGVKFKRGIRHLSSLQKLRKVDARDNGDVIMKELKNLKQIRDLGIYIHRKDGTLLCDAIECMAYLRSLSIKAAEEEVIDLESLIVSPQSLQRLYLDGRLRKLPDWVPKLKSLVKLRLYGSQLTEDPLPLIKDLSSLVELQLYESYKGHELCFQEGWFMKMKVLVVELSTLVTFKIEGGGMPYLQLLKLYGRRPEMLQVPTHVRQVMRFRRF* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1724 869 PANTHER - 34 864 - -
Apr10g1724 869 Coils Coil 454 474 - -
Apr10g1724 869 Pfam NB-ARC domain 177 417 IPR002182 GO:0043531
Apr10g1724 869 Gene3D Ribonuclease Inhibitor 543 863 IPR032675 -
Apr10g1724 869 Gene3D - 150 321 IPR027417 -
Apr10g1724 869 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 430 IPR027417 -
Apr10g1724 869 Gene3D - 4 117 - -
Apr10g1724 869 Gene3D - 422 508 IPR036388 -
Apr10g1724 869 PRINTS Disease resistance protein signature 190 205 - -
Apr10g1724 869 PRINTS Disease resistance protein signature 271 285 - -
Apr10g1724 869 PRINTS Disease resistance protein signature 364 378 - -
Apr10g1724 869 PRINTS Disease resistance protein signature 621 637 - -
Apr10g1724 869 PANTHER DISEASE RESISTANCE PROTEIN RP 34 864 IPR044974 GO:0006952
Apr10g1724 869 Gene3D - 330 420 IPR042197 -
Apr10g1724 869 CDD RX-CC_like 2 132 IPR038005 -
Apr10g1724 869 Pfam Rx N-terminal domain 5 89 IPR041118 -
Apr10g1724 869 Coils Coil 113 133 - -
Apr10g1724 869 SUPERFAMILY L domain-like 496 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1724 Apr-Chr10 30112099 30116410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1724 191 371 WRKY Transcription Factor Family AT5G45050 30.851 7.39e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1724 K13457 - qsu:111996002 669.463