Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1723 ATGGCAGAAATTGCCGTGAATCTTGTAACTGACAAGTTGATTCCTTTACTGGAAAATGAAGTTAATCTGGCCAATGATGTGTGTAGCCAACTTGTGTTAGTGAAAGTTCAATTACGACTAATAAGAGCATACCTTAAAGATGCAGACTCAAAGGCAGAAATAGTAAAAACCGGTAATGTGGTGAAAGAGTGGGTGACTCAAATGAGAGAAGTTTCTTTTTACATTGAAGATGTCATTGATGAATATTTATACCTAGAGGATAATATGCTTCAAGGCAGGGACTTGTGTGGTGTTGTTGGTATGATTGTATGTAAAATTTATGACTTTCTTAGAAGTGTAATTGCCCATCATGGGATTTCAGCACAACTTGGTGAAATTGAAAAAAGATTAGAGGAACTCAACAAAGCAAAGGAAACTTATGGATTGAGTTCATCAGCTTCAGAATCAAGTAGTGACACTACACTACATTATCTTCGACAGGGTGCCCTTTTTGTTGAGGATGATCAACTTGTGGGGGTTGAACCCACCAAGCAAGTACTAACCAATTGGTTATTGGAGAATGGTAGTCGCACTGTCATCTCAGTGGTGGGCGATGGAGGATTTGGAAAAACAACCATTGTGAACAAGGTATTCAACGAGCAAAAGGAAAAACATTTTGATTGCTATGCATGGGTCACTGTGTCTCAATCACTTGGGGGGAAAAATCTCCTGAAGACTTTGAGAAGGAGATTTTATGAGGAGGCCAATGATAAAAATGCAACTAAGGAAATTAGTGACATGGACAATGATACTCTGGTAAGAAAATTACGGGAATACTTACATGAAAAGAGCTATATGATTGTGTTTGATGATGTGTGGGAGGAGAGCTTTTGGGGAGATGTAGAATATGCATTACCAAGAGGCAAGGGTAAGATAATCATCACCACAAGGCACAAGAAAGTTGCTGAGTTTTGTGGACGTTCTGGACCAATTCATGTCCATGACATGAAACCACTAAGTCCAGATGATGCTTGGAAGCTTTTTTGTAGTAAGGCATGTCCCGAAGGTTGTCCTGATGATTTGAAAGGATTGTCTTTGCAGTTTGTTAACAAGTGCAATGGATTGCCACTAGCAATTGTGGCTATTGCTGGTCTCCTCTCAACCAAAAACGTAAGTGTTTTAGAATGGAAAAAGGTATACGATAGCCTACGTTCAAAACTTTCAAGTGATCCCTATCTTAGTAGTTTACACCAAGTTTTATCTGAAAGTTACCAAGATCTTAGTTACAACCTTAAATCTTGCCTCTTATACTTTGGCCTTTTCCCTGAGGACTATTCAATTAGTTGTGTGAGACTTGTTAATTTGTGGATAGCAGAGGGTTTTGTAGAAAACAAAGAGAATGAAGGTCAAACACTAGAAGAAGTAGCAGAAGAATACTTGAGTGAGCTTATTGCAAGGAACTTGGTTAAAGTGGCTAAAAAATATTCGTATGGTAGGGTTAGAAATTGCCGGGTCCACGATTTAATGCATAACTTTATTCTCAAAAAGTGTGAGGAGCTAAAATTTTGTCAAGTGAAGAAAAGTCAGGAGTTTAAGTTACAAGAATGGACTCGGCGCTTATCAATTGACACATACATTGATGATGTTTCTTTGGAAAGAAGCGTTGCAAATTATAGACTAACAAGGTCTTGTTTTCATTTTAACATTACCCACGATATGCCAACTTCCATCTTTGAATCATTGTTCTCTAGCTTTAAGTTGTTGGTTAGATTAGACTGTGAAAATACACCCCTCAGTTATCTTCCTAAAGCAGTTGGTAACTTACTCCATTTGAAATATTTGAACTTAAGGAATACTAGTGTTGAGATGATTCCAAAATTCATTGGCAAGTTGAAGAACCTTGAGACTTTGGATCTTAAAAATACTTATGTGCGTGAATTGCCCTTAGAGATCAATAAACTTACTAAGTTGCGTCTTCTTTTGGTATATCACACTGATTCACATATCTTAGGTGTGAAATTAAAGGAAGGGATTGGTCATCTAAGGGCTTTACAGAAGTTACGCATGGTTGATGCAAGTGATGATGAAGATAGCATTATAAGAGAACTGAAGAATTTGAAGCAAATGAGGCATTTAGGCATATGTATGCTAAATAAAGAAAATGAAGAATTATTATGCAGTGCCATAGAGAGCATGACTAATCTATGCACATTGGCAATTAAGTTCATGAGTAAAATTGATCAAGTTCTTCACTTGGAATCATTAAGAGATCCTCCTCAACACCTCCAACGCATTTACTTATATGGGCGTTTAGAAAAATTGCCAAATTGGATTTCAAAGCTTAAAAATCTAGCCAGATTGCGGTTGTATCAATCAGGATTAATAGAAGATCCATTGCCTCTTCTTAAAGACTTGTCAACGTTGTTGGAGTTTGATCTTTGGGAGTCCTATGAAGGTAATGAATTGTACTTTCAAAAGGGATGGTTTATGAATTTGAAAGTATTGAAAGTTGGCTTGTCCACGTTGGTAACATTTAAAATAGATGAAGGAGCAATGCCTCACCTTCAATTGTTGGAATTATCTATACGCCCTCAAACAGTGCAAGTGCCAACTCACATTCAGCAACTCATCAAATCATGA 2619 0.3723 MAEIAVNLVTDKLIPLLENEVNLANDVCSQLVLVKVQLRLIRAYLKDADSKAEIVKTGNVVKEWVTQMREVSFYIEDVIDEYLYLEDNMLQGRDLCGVVGMIVCKIYDFLRSVIAHHGISAQLGEIEKRLEELNKAKETYGLSSSASESSSDTTLHYLRQGALFVEDDQLVGVEPTKQVLTNWLLENGSRTVISVVGDGGFGKTTIVNKVFNEQKEKHFDCYAWVTVSQSLGGKNLLKTLRRRFYEEANDKNATKEISDMDNDTLVRKLREYLHEKSYMIVFDDVWEESFWGDVEYALPRGKGKIIITTRHKKVAEFCGRSGPIHVHDMKPLSPDDAWKLFCSKACPEGCPDDLKGLSLQFVNKCNGLPLAIVAIAGLLSTKNVSVLEWKKVYDSLRSKLSSDPYLSSLHQVLSESYQDLSYNLKSCLLYFGLFPEDYSISCVRLVNLWIAEGFVENKENEGQTLEEVAEEYLSELIARNLVKVAKKYSYGRVRNCRVHDLMHNFILKKCEELKFCQVKKSQEFKLQEWTRRLSIDTYIDDVSLERSVANYRLTRSCFHFNITHDMPTSIFESLFSSFKLLVRLDCENTPLSYLPKAVGNLLHLKYLNLRNTSVEMIPKFIGKLKNLETLDLKNTYVRELPLEINKLTKLRLLLVYHTDSHILGVKLKEGIGHLRALQKLRMVDASDDEDSIIRELKNLKQMRHLGICMLNKENEELLCSAIESMTNLCTLAIKFMSKIDQVLHLESLRDPPQHLQRIYLYGRLEKLPNWISKLKNLARLRLYQSGLIEDPLPLLKDLSTLLEFDLWESYEGNELYFQKGWFMNLKVLKVGLSTLVTFKIDEGAMPHLQLLELSIRPQTVQVPTHIQQLIKS* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1723 872 Pfam Rx N-terminal domain 5 85 IPR041118 -
Apr10g1723 872 Gene3D Ribonuclease Inhibitor 548 871 IPR032675 -
Apr10g1723 872 Coils Coil 455 475 - -
Apr10g1723 872 Pfam NB-ARC domain 176 418 IPR002182 GO:0043531
Apr10g1723 872 PANTHER - 34 864 - -
Apr10g1723 872 CDD RX-CC_like 2 133 IPR038005 -
Apr10g1723 872 SUPERFAMILY L domain-like 497 856 - -
Apr10g1723 872 Gene3D - 149 323 IPR027417 -
Apr10g1723 872 Gene3D - 332 421 IPR042197 -
Apr10g1723 872 Gene3D - 422 509 IPR036388 -
Apr10g1723 872 PANTHER DISEASE RESISTANCE PROTEIN RP 34 864 IPR044974 GO:0006952
Apr10g1723 872 Coils Coil 116 136 - -
Apr10g1723 872 Gene3D - 4 120 - -
Apr10g1723 872 PRINTS Disease resistance protein signature 192 207 - -
Apr10g1723 872 PRINTS Disease resistance protein signature 272 286 - -
Apr10g1723 872 PRINTS Disease resistance protein signature 365 379 - -
Apr10g1723 872 PRINTS Disease resistance protein signature 622 638 - -
Apr10g1723 872 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 431 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1723 Apr-Chr10 30099585 30105527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1723 193 372 WRKY Transcription Factor Family AT5G45050 26.738 5.79e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1723 K13457 - cit:102626159 669.848