Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1722 ATGGCAGAAATTGCAGTGAACCTTGTGATTGACAAGTTGATCCCTTTACTCAGAGATGAAGTCGATCTTCAGAGAGGAGTGTCAAACCAACTTGAGTCAGTGAAAGACCAATTACAAATGATTCGTGCTTACTTAAAGGATGCAGATGCAAAAGCAGAGACGGGAAAAACCAACCACTTAGTGAAAATGTGGGTCATGCGAATGAGACGAGTTTCATATCGTATTGAAGATGTGATTGATGAGTACTTGTTGCAAGTGCACAATAAGTTTCAAGACAATGGTGGGGTTGCTTGCTTCATATGTGAAATTTGTGACTTGCTCAGATCTGTCATGCTCAGCCATAAGATTGCATCACAGATTGATGAGATAAGAGAATCAATAGCTTTACTCAGCAGAGAAAAAGAAACTTTTGGGTTCAATCCATCTGCTTTGGAACCAAGGAGTGATACTGCCACGGTGCATTATCTTCGACAAGGTGCCCGTTTCATTGAGGATGATCAGCTTGTAGGGATTGACCATATCAAGCAAGTACTATCCAGTTGGTTGTCAGAACAAGGTAGTCGCACTGTGATCTCAGTGGTAGGCGAAGGTGGTCATGGTAAAACAACTGTTGTGAACAAGGTATTTAATCAAAAGAAGAGGGAAGCATCTTTTAATTGCTATGCTTGGATCACTGTATCCCGATTGCTCAAGGGAGAGGATCTATTGAAGGATTTGCTAAAGAGGCTTTATGAGGAGGCTGGGGACAAAGAATCCGTCAAAGAAATTAGTGAAATGTACGGAAACGCTCTGGTAATAAAACTGAGAGAATACTTACAAGGAAAGAGCTATTTTATTGTTTTTGATGATGTATGGGAAGAAAGCTTTTGGGGAGACGTAGAACATGCATTACCAAGAGACAGGGGTATGATAATCATCACGACAAGAGATAGGAGAGTTGCTGAGTTTTGTGGAGCTCATGGACCAATTCACAACTATGACATGCAACCACTAAATCGTAAGGATGCTTGGAACCTTTTTTGTCTGAAGGCTTTCCGAGAAGATTGTCCCAAAGATTTGAAAGGATTGTCAGAAGAGTTTGTTAAGAAGTGCAATGGAGTGCCACTTGCGATTGTGGCTATTGCAAGTCTCCTCTCAACCAAAAACAAAAATGTCTTAGAATGGAAAAGGGTATATGATAGCCTACGCTCAAAACTTTCAAGTGATCCCCATCTTAGCTGCGTCCATCAGGTTCTGTCTGAAAGTTACCAAGATCTTAGTTACCACCTCAAGTCATGCCTCTTATACTTTGGCCTTTTCCCTGAGGATTACTCGATCAGTGGTGTGAGGCTCATTAATTTGTGGATAGCAGAGGGTTTTGTAGAGAACAAAGGGAATGATGGTCAAATTCTCGAGGAAGTAGCAGAAGAATACTTAAACGAGCTTATTGCTAGGAGCTTGGTTAAAGTGGTTGAATTGTTCCCGTATGGCCGGGTTAGACGTTGTAGGGTCCATGACTTGATGCATGATTTTATTCTCAGAAAGTGTGAGGAGCTGAACTTTTGTCAAGTGAAGAAAAGTAAGAGACTCGTGTTGCATGAGTGGACTCGGCGCTTGTCAATTGACGAATGTGTTGACGATGATCCTGTGAAGAAAAGTGTTGCAAACTATGGGCTAATAAGGTCCTGTTTTCTTTTTGGGATTAATGAAGACGCAACAACTTCTGTGTTGGAATCATTGTTCTCAAGATTTAAGCTCTTGGCAATATTAGACTGTGAAGGTGCACCTCTTGATTATCTTCCAAAAGCAGTTGGAGACTTGTTTCATTTGAAATATTTGAGTTTAAGGAATACTGGTATCTCCACGATTCCCAAGTTCATTGGTAAGTTGCAGAATCTTGAGACCCTGGACTTAAAATATACTCGTGTGCTGGAATTGCCATGTGAGATTAACAGACTTGTTAAGTTGCGTCATCTTTTGGCATACGAGTCTTTCGGTGTGGGTGTGAAATTGAAGGCAGGAATTAGACATCTAAGTTCACTGCAGAAGTTAAGAATGGTTGATGCACGTGATAATGGGGATGTGATTATGAAAGAACTGAAGAATCTGAAGCAGATAAGGGATTTGGGCATTTTTAATATAAATAGAAAAGATGGGATATTATTATGCAATGCTATAGAGTGCATGACTTATTTGAGGTCATTAGCAATTAAAGCAGCTGAAGAAGAAGTTATTGAGTTGGAGTCATTAAGTGTTTGTCCTGAGCGTCTCCAACGCCTTTACTTAGAGGGGCGTTTGGAAAGGTTGCCACATTGGCTTCCCGAACTTAAAAGTCTTTGGAAGCTGCGGTTGTCTGGATCACACTTAACAGAAGATCCGTTGCCTCTTATCAAAGACTTGTCAGCACTGGTAGAGCTCCAACTTTATGAGTCATATGAAGGCAAGGAGTTGTGTTTCGAAGAGGGATGGTTTCAGAATCTGAAGGTTTTAAGAGTTCTGCTTTCCACTTTGGTAACATTAAAAATAGAAGAAGGAGCAATGCCTTACCTTCAATCGTTCTATTTAAATGAACCCCCTCGAACGGTGGATGTGCCAACTCATGTTCAACAAGTTATCAAATACGGATACATTTGGTGGTGA 2619 0.4078 MAEIAVNLVIDKLIPLLRDEVDLQRGVSNQLESVKDQLQMIRAYLKDADAKAETGKTNHLVKMWVMRMRRVSYRIEDVIDEYLLQVHNKFQDNGGVACFICEICDLLRSVMLSHKIASQIDEIRESIALLSREKETFGFNPSALEPRSDTATVHYLRQGARFIEDDQLVGIDHIKQVLSSWLSEQGSRTVISVVGEGGHGKTTVVNKVFNQKKREASFNCYAWITVSRLLKGEDLLKDLLKRLYEEAGDKESVKEISEMYGNALVIKLREYLQGKSYFIVFDDVWEESFWGDVEHALPRDRGMIIITTRDRRVAEFCGAHGPIHNYDMQPLNRKDAWNLFCLKAFREDCPKDLKGLSEEFVKKCNGVPLAIVAIASLLSTKNKNVLEWKRVYDSLRSKLSSDPHLSCVHQVLSESYQDLSYHLKSCLLYFGLFPEDYSISGVRLINLWIAEGFVENKGNDGQILEEVAEEYLNELIARSLVKVVELFPYGRVRRCRVHDLMHDFILRKCEELNFCQVKKSKRLVLHEWTRRLSIDECVDDDPVKKSVANYGLIRSCFLFGINEDATTSVLESLFSRFKLLAILDCEGAPLDYLPKAVGDLFHLKYLSLRNTGISTIPKFIGKLQNLETLDLKYTRVLELPCEINRLVKLRHLLAYESFGVGVKLKAGIRHLSSLQKLRMVDARDNGDVIMKELKNLKQIRDLGIFNINRKDGILLCNAIECMTYLRSLAIKAAEEEVIELESLSVCPERLQRLYLEGRLERLPHWLPELKSLWKLRLSGSHLTEDPLPLIKDLSALVELQLYESYEGKELCFEEGWFQNLKVLRVLLSTLVTLKIEEGAMPYLQSFYLNEPPRTVDVPTHVQQVIKYGYIWW* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1722 872 Pfam Rx N-terminal domain 5 88 IPR041118 -
Apr10g1722 872 Gene3D - 4 117 - -
Apr10g1722 872 Pfam NB-ARC domain 177 417 IPR002182 GO:0043531
Apr10g1722 872 SUPERFAMILY L domain-like 496 850 - -
Apr10g1722 872 Gene3D - 330 420 IPR042197 -
Apr10g1722 872 Gene3D - 422 508 IPR036388 -
Apr10g1722 872 PANTHER - 30 860 - -
Apr10g1722 872 PRINTS Disease resistance protein signature 190 205 - -
Apr10g1722 872 PRINTS Disease resistance protein signature 271 285 - -
Apr10g1722 872 PRINTS Disease resistance protein signature 364 378 - -
Apr10g1722 872 PRINTS Disease resistance protein signature 621 637 - -
Apr10g1722 872 Gene3D Ribonuclease Inhibitor 543 866 IPR032675 -
Apr10g1722 872 Gene3D - 151 321 IPR027417 -
Apr10g1722 872 CDD RX-CC_like 2 127 IPR038005 -
Apr10g1722 872 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 430 IPR027417 -
Apr10g1722 872 PANTHER DISEASE RESISTANCE PROTEIN RP 30 860 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1722 Apr-Chr10 30076580 30080695 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1722 191 523 WRKY Transcription Factor Family AT5G45050 26.471 5.56e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1722 K13457 - csin:114256860 667.151