Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1720 ATGGCAGAAATTGCGGTGAACCTTGTGATTGACAAGTTGATCCCTTTACTTAGAGATGAAGTTAACCTTCAGAGAGGAGTGCCAAACAAACTTGAGTCAGCGAAAGACCAGTTGCAAATGATTCGTGCTTACTTAAAGGATGCAGATGCCAAGGCAGAAATGGGAAAAACCAACCACTCCGTGAAAGAGTGGATCATGCAAATGAGACAAGTTTCATATCGTATAGAAGATGTGATTGATGAGTACTTGTTGCAATTGCACAATAAGCTGCAAGACACTTGTGGGGTTGCTAGTGTCATATGTAAAATTTGTGACTTGCTCAAATCAGTCATGTCCCGCCATAAGATTGCATCACAGATTGATGAGATCAGAGACTCAATAGAAAGACTCAGCAGAGAAAAGGAAACTTATGGGTTCAATCCATCTGCTTTGGAACCAAGGAGTGATATTGCCACGGTGCATTATCTTCGACAGGGTGCCCTTTTCATTGAGGATGATCAGCTTGTGGGGATTGACCATATCAAGCAAGTACTATCCAGTTGGCTGTCAGAACAAGATAGTCGCACTGTGATCTCAGTGGTAGGCGAAGGTGGTCATGGTAAAACAACGGTTGTGAACAAGGTATTTAATCAAAAGAATAAGGAAGCATCTTTTAATTGTTATGCTTGGATCACTGTATCCCGTTTGCTCAAGGGAGAGAATCTATTGAAGGATTTGCTAAAGAGACTTTATGAGGAGGCTGGCGACAAAGGATCAGTCAAAGAAATTAGTGAAATGGACAGAAACGCTCTGGTAATAAAACTCAGAGAATACTTACAAGGAAAGAGCTATTTGATTGTTTTTGATGACGTATGGGAAGAAAGCTTTTGGGGAGACGTAGAACATGCATTACCAAGAGACAAGGGTATGATAATCATCACGACAAGAGATAGGAGAGTTGCTGAGTTTTGTGGAGGTCATGGACCAATTCACATCTATGACATGCAACCACTAAACCATGGTGATGCTTGGAACCTTTTTTGTGTGAAGGCTTTTCGAGAAGGTTGTCCCAAAGATTTGAAAGGATTGTCAGAAGAGTTTGTTAAGAAGTGCAATGGAGTGCCACTTGCAATTGTGGCTATTGCTAGTCTCCTCTCAACCAAAAACAAAAATGTCTTAGAATGGAAAAGGGTATATGATAGCCTACGCTCAAAACTTTCAAGTGATCCCCATCTTAGCAGCGTCCATCAGGTTCTGTCTGAAAGTTACCAAGATCTTAGTTACCACCTCAAGTCATGCCTCTTATACTTTGGCCTTTTTCCCGAGGATTACTCGATCAACTGTGTGAGGCTCATTAATTTGTGGATAGCAGAGGGTTTTGTAGAGAACAAAGAGAATGATGGTCAAATACTTGAGGAAATAGCAGAAGAATACTTGAATGAGCTTATTGCTAGGAGCTTGGTTAAAGTGGTTAAAGCGTCCTCCTATGGCCGAGTTAGCCGTTGTAGGGTCCATGATTTGATGCACGATTTTATTCTCAGAAAGTGTGAGGAGCTGAACTTTTGTCAAATGAAGGAAAATAAAAGACTCGAGTTGCATGAGTGGACTCGGCGCTTGTCAATTGACGAATGTGTTGAGGATGATCCTGTGAAGAAAAGTGTTGCAAACTATGGGCTAATACGGTCTTGTTTTCTTTTTCGGATTGATCGAGACACACCAAATTCCGAGTTTGAGTCATTGTTCTCAAGATTTAAGCTCTTGGCAAGATTAGACTGTGAACGTGCACCTCTTGGTTATCTTCCAAAAGCAGTTGGAGACTTATTTCATTTGAAATATTTGAGTTTAAGGAATACTGGTATCCGCACGATTCCCAAGTTCATTGGTAAGTTGCAGAATCTTGAGACCCTGGACTTAAAATTTACTCGGGTGCGTGAATTGCCACGTGAGATTAACAGACTTGTTAAGTTGCGTCATCTTTTGGCATATACCTTCAGTGTCGGTGTGAAATTGAAGGTAGGAATTGGACATTTAAGTTCACTGCAGAAGTTAAGAAAGGTTAATGCACGTGATAATGGGGATGTGATTATGAAAGAACTGAAGAATCTGAAGCAGATAAGGGATTTGGGAATTGTTAATATAAATAGAAAAGATGGGACATTATTATGCAATGCTATAGAGTGCATGGCTTATTTGAGGTCATTATCAATTAAAGCAGCTGAAGAAGAAGTTATTGAGTTGGAGTCATTAAGTGTTTGTCCTGAGAGTCTCCAACGCCTTTACTTAGATGGGCGTTTGGAAAAGTTGCCACATTGGGTTCCCAAACTTAATAGTCTTGTGAAGCTGCGCTTGTATGAATCACACTTAACAGAAGATCCATTGCCTCTTATCAAAGACTTGTCAGCACTGGTAGAGCTCCAACTTCGTGAATCGTATGAAGGTAAGGAGCTGTGTTTCAAAGAGGGATGGTTTATGAATCTGAAGGTTTTGAGAGTTTATCTTTCCACTTTGGTAACATTAAAAATAGAAGGAGGAGCAATGCCTTACCTTCAATTGTTGGGATTATCTGAACACCCTGAAATGGTGCAGGTGCCAACTCATGTTAGACAAGTTATCAAAAGGATGATTTAG 2607 0.4047 MAEIAVNLVIDKLIPLLRDEVNLQRGVPNKLESAKDQLQMIRAYLKDADAKAEMGKTNHSVKEWIMQMRQVSYRIEDVIDEYLLQLHNKLQDTCGVASVICKICDLLKSVMSRHKIASQIDEIRDSIERLSREKETYGFNPSALEPRSDIATVHYLRQGALFIEDDQLVGIDHIKQVLSSWLSEQDSRTVISVVGEGGHGKTTVVNKVFNQKNKEASFNCYAWITVSRLLKGENLLKDLLKRLYEEAGDKGSVKEISEMDRNALVIKLREYLQGKSYLIVFDDVWEESFWGDVEHALPRDKGMIIITTRDRRVAEFCGGHGPIHIYDMQPLNHGDAWNLFCVKAFREGCPKDLKGLSEEFVKKCNGVPLAIVAIASLLSTKNKNVLEWKRVYDSLRSKLSSDPHLSSVHQVLSESYQDLSYHLKSCLLYFGLFPEDYSINCVRLINLWIAEGFVENKENDGQILEEIAEEYLNELIARSLVKVVKASSYGRVSRCRVHDLMHDFILRKCEELNFCQMKENKRLELHEWTRRLSIDECVEDDPVKKSVANYGLIRSCFLFRIDRDTPNSEFESLFSRFKLLARLDCERAPLGYLPKAVGDLFHLKYLSLRNTGIRTIPKFIGKLQNLETLDLKFTRVRELPREINRLVKLRHLLAYTFSVGVKLKVGIGHLSSLQKLRKVNARDNGDVIMKELKNLKQIRDLGIVNINRKDGTLLCNAIECMAYLRSLSIKAAEEEVIELESLSVCPESLQRLYLDGRLEKLPHWVPKLNSLVKLRLYESHLTEDPLPLIKDLSALVELQLRESYEGKELCFKEGWFMNLKVLRVYLSTLVTLKIEGGAMPYLQLLGLSEHPEMVQVPTHVRQVIKRMI* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1720 868 Pfam NB-ARC domain 177 417 IPR002182 GO:0043531
Apr10g1720 868 PANTHER - 30 860 - -
Apr10g1720 868 Coils Coil 454 474 - -
Apr10g1720 868 SUPERFAMILY L domain-like 496 849 - -
Apr10g1720 868 Gene3D - 422 508 IPR036388 -
Apr10g1720 868 Gene3D Ribonuclease Inhibitor 545 863 IPR032675 -
Apr10g1720 868 PRINTS Disease resistance protein signature 190 205 - -
Apr10g1720 868 PRINTS Disease resistance protein signature 271 285 - -
Apr10g1720 868 PRINTS Disease resistance protein signature 364 378 - -
Apr10g1720 868 PRINTS Disease resistance protein signature 621 637 - -
Apr10g1720 868 PANTHER DISEASE RESISTANCE PROTEIN RP 30 860 IPR044974 GO:0006952
Apr10g1720 868 Coils Coil 31 51 - -
Apr10g1720 868 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 430 IPR027417 -
Apr10g1720 868 Gene3D - 4 117 - -
Apr10g1720 868 CDD RX-CC_like 2 132 IPR038005 -
Apr10g1720 868 Pfam Rx N-terminal domain 5 88 IPR041118 -
Apr10g1720 868 Gene3D - 150 321 IPR027417 -
Apr10g1720 868 Coils Coil 113 133 - -
Apr10g1720 868 Gene3D - 331 420 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1720 Apr-Chr10 30031164 30035159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1720 191 371 WRKY Transcription Factor Family AT5G45050 32.447 1.72e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1720 K13457 - qsu:111996002 680.248