Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1717 ATGGATCATGTTGCATATGCATCACTCCCTTCAGAACCCTCAGAAGAAGAGTTTTGTCTTGCACTTCGCAATGGCCTCATTCTCTGCAACGTTCTCAACAAAGTCAACCCTGGTGCTGTGCTCAAGGTGGTGGAGAACCCTGTCCTTGCTGTTCAGTCTGCAGAGGGAGCGGCTCATTCTGCAATTCAGTATTTTGAGAACATGAGGAACTTTCTGGAGGCTGTTAAGGATATGCAGCTTTTGACCTTTGAAGCTTCTGATTTGGAGAAGGGGGGTTCATCAAATAAAGTTGTGGACTGCATTCTATGTTTAAAGGGGTATTATGAATGGAAGCTATCTGGTGGAGCTGGTGTGTGGAGGTATGGGGGAACTGTGAGGATTACTTCCTTTCCAAAGAAATCTCCTTCCTCCATAGTTGGCAGTGAAAGTGCTGATGAATCGCTGGATGAGTCAGAGTCATCACAATATGAACAGCTGCTAGAATTTCTTCAACTATCTGAAGAGTTCTTGATTGAAGAAACCAGAACTGCCAATGCTCTGGCTTTCCTTTTTGATCACTTTGGACTTAGACTTCTTCAGGCTTACCTTAGAGAGACCAATGGAATTGAAGATCTGCCTCTGAATGCAATGGTGATTGATACCTTACTCAGCAAGGTAGTCAAGGATTTTTCATCGTTGCTTGTTTCTCAAGGCACTCAGCTTGGACTTTTCTTGAAGAAAATATTGAAAGGAGATATTGGTTGTCTCTCAAAGAGAGAGTTCATAGAAGCCATCTCACTATATCTTAATCAAAGAAGTAGTTTGGCATCAAATGATTTCTCCAAATTCTGCATCTGTGGTGGAAAACGTGACAACAGTATTCGACAAAATGTCAATTATTCTGCTAAGTATGCAGACGTAATAAATACTCAGCAGAAACAACTTGAGGGGATGAAATACTTTTTTGAAGAGACAAAACTGGAGGTCAAACAAATTCAATCAGAGTGGGATCAAGAAATGAGTAGGCTAGAGCATCATATCAAGAGCCTTGAAGTGGCCTCCTCTTCCTACCATAAAGTTTTGGAGGAGAATCGTCTTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTATTGTAGAGTAAGGCCCTTCTTATCAGGACAATCAAATGGACAGTCTACAGTAGACTATATTGGAGAAAACGGAGATATGATGATCGTAAATCCCCTTAAGCATGGAAAAGATGCTAGAAGGGTATTTTCATTCAATAAGGTGTTTGGAACAAGTGTAACACAAGAACAAATTTATGCTGATACTCAATCGTTAATCAGATCTGTTTTAGATGGTTATAATGTATGCATCTTTGCATATGGACAGACTGGCTCAGGGAAGACCTACACAATGAGTGGCCCTGATATGACAACTGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTTCATATATCAAAGGAAAGGGCAGATTCCATAAAATATGAAGTATTTGTTCAGATGATTGAAATATACAATGAACAAGTGAGAGATTTGTTAGTCAGTGATGGCTCTAACAGAAGATTAGATATACGAAACAATTCCCAATTGAATGGCTTCAATGTGCCTGATGCATTTTTAGTTCCTGTTACTTGTACTCAAGATGTTCTGGACTTGATGAGAATTGGTCAGAAGAATCGTGCTGTGGGTGCTACAGCTCTAAATGAGAGAAGTAGTCGTTCTCATAGTGTTTTGACAGTTCATGTGCGAGGCATGGAGTTAATTTCAAACTCCATTCTTAGAGGTTGTCTCCACCTTGTGGATTTGGCTGGCAGCGAGAGGGTTGACAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCCCAACATATAAATAGATCACTTTCTGCACTTGGCGATGTTATCTCTGCCTTGGCACAGAAAAGTCCACATATCCCTTACAGAAATAGCAAGCTCACACAAGTGTTACAAGATTCCTTAGGTGGGCATGCAAAAACTTTGATGTTTGTTCATATCAATCCTGAACTTAATGCTATTGGTGAGACAATTAGCACACTTAAGTTTGCTGAGAGAGTTTCATCCATTGAACTTGGGGCTGCTCAATCTAATAAAGAAACTGGTGAAATCCGAGAACTAAAGGAAGAGATATCAAATCTCAAATTGGCATTGGAGAGGAAGGAAGTAGAACTGGAGCAGTGGAAGGCAGGGAATGCTCAAAACACCATAGAATCTCAAAAACCAAGAGCTGTTTCACCTTTTCATTTACCAAAATATGGTTCTAGTAGCAGCATGAAGCCTGAAGCTAGTCAACCACTCATAGATGATAGAAGCTTTGAGTCTAGAAGTTGCTCTTCGGGTAAGCAAAGAAGGTCAAGATTTCCATCAACATTTATGGACAAGGAATCCATGCCAAAAATGTCTCTTCTGACTGAAGAGAAGTTAGTGAGCTCAGGGAAGGGAAGATCACCATCCCCTCCAGTCAGAAGATCACTATCTAATGATAGAGGGTCAGTCATAAAAAGCAAGGTCAAGACTGAAACAGTAGACAATCAACCAATATTAAAGCATCCATTTCCAGCTAGAGTACCTGCTAACAAATCCCTTATCACAATGCCAACAACTACATCCACTGACAACAACACGAGGGTGTATGTGAATTCACAAGAGCCAGTAAAGCATGAAAATATTTCTGAAACACTCTTCAATCTCCAGAAGGTAAACTCCAGGAAAGTTCATCAAGAACATGAAGAGGAACAATTCAAGCAAGCACTCAGTGTAGTAAGACAAGGTGCTATCAGAAAAAGCAAGGTTGAGAGTAAGGCTAAGGCCAAGCATCATCAACTATCATCCTTTAAGATTCAAAAGCCTGATTTGATCCCAACATATATTTCTGACTTGGAAATTGCTGGTGATATGACTCTCGAGCCACCTCCAAAGGACGATTACTCTGAGGCTGAAAATGACCTTAGATTTATTGAGTCTGCTGCACATGGTGCTTTAAATCTCAAAAAGATACAGCAGAACTTTCCAAGGAATTTTCAGAACCTTGAATCAAGAGGAATAGTGCAAGCAGGAGAGCCTTTATTGGCTAGCAAAGTTGAAAACAAACTTTTGAATGGTTCAGGTAGCAATCTTAAAGAAGGAAGTAATACATCCATCCCTGAATTTAGAAGGAGCCGATCTACTCCACGTGGAAAGTTTTTTGGTTTATCTTGA 3225 0.404 MDHVAYASLPSEPSEEEFCLALRNGLILCNVLNKVNPGAVLKVVENPVLAVQSAEGAAHSAIQYFENMRNFLEAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGYYEWKLSGGAGVWRYGGTVRITSFPKKSPSSIVGSESADESLDESESSQYEQLLEFLQLSEEFLIEETRTANALAFLFDHFGLRLLQAYLRETNGIEDLPLNAMVIDTLLSKVVKDFSSLLVSQGTQLGLFLKKILKGDIGCLSKREFIEAISLYLNQRSSLASNDFSKFCICGGKRDNSIRQNVNYSAKYADVINTQQKQLEGMKYFFEETKLEVKQIQSEWDQEMSRLEHHIKSLEVASSSYHKVLEENRLLYNQVQDLKGAIRVYCRVRPFLSGQSNGQSTVDYIGENGDMMIVNPLKHGKDARRVFSFNKVFGTSVTQEQIYADTQSLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDMTTEETWGVNYRALRDLFHISKERADSIKYEVFVQMIEIYNEQVRDLLVSDGSNRRLDIRNNSQLNGFNVPDAFLVPVTCTQDVLDLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGMELISNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAIGETISTLKFAERVSSIELGAAQSNKETGEIRELKEEISNLKLALERKEVELEQWKAGNAQNTIESQKPRAVSPFHLPKYGSSSSMKPEASQPLIDDRSFESRSCSSGKQRRSRFPSTFMDKESMPKMSLLTEEKLVSSGKGRSPSPPVRRSLSNDRGSVIKSKVKTETVDNQPILKHPFPARVPANKSLITMPTTTSTDNNTRVYVNSQEPVKHENISETLFNLQKVNSRKVHQEHEEEQFKQALSVVRQGAIRKSKVESKAKAKHHQLSSFKIQKPDLIPTYISDLEIAGDMTLEPPPKDDYSEAENDLRFIESAAHGALNLKKIQQNFPRNFQNLESRGIVQAGEPLLASKVENKLLNGSGSNLKEGSNTSIPEFRRSRSTPRGKFFGLS* 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1717 1074 MobiDBLite consensus disorder prediction 1042 1061 - -
Apr10g1717 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 735 IPR027417 -
Apr10g1717 1074 MobiDBLite consensus disorder prediction 742 838 - -
Apr10g1717 1074 Pfam Kinesin motor domain 376 698 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr10g1717 1074 Gene3D - 1 108 IPR036872 -
Apr10g1717 1074 Pfam Calponin homology (CH) domain 16 109 IPR001715 GO:0005515
Apr10g1717 1074 Gene3D Kinesin motor domain 313 700 IPR036961 -
Apr10g1717 1074 Coils Coil 705 739 - -
Apr10g1717 1074 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 1069 - -
Apr10g1717 1074 ProSiteProfiles Calponin homology (CH) domain profile. 1 109 IPR001715 GO:0005515
Apr10g1717 1074 PRINTS Kinesin heavy chain signature 445 466 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr10g1717 1074 PRINTS Kinesin heavy chain signature 568 585 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr10g1717 1074 PRINTS Kinesin heavy chain signature 599 617 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr10g1717 1074 PRINTS Kinesin heavy chain signature 648 669 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr10g1717 1074 SUPERFAMILY Calponin-homology domain, CH-domain 9 129 IPR036872 -
Apr10g1717 1074 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 1 1069 - -
Apr10g1717 1074 ProSiteProfiles Kinesin motor domain profile. 370 698 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr10g1717 1074 MobiDBLite consensus disorder prediction 1042 1074 - -
Apr10g1717 1074 SMART kinesin_4 368 706 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1717 Apr-Chr10 29998636 30007405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1717 287 698 Calmodulin-binding Proteins AT5G65930 36.443 2.08e-73 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1717 K10406 - gmx:100793458 1855.88