Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1716 ATGCCTGGAAGCTTAAGGAATCTATCACTTTCTCCCAAAATCTTCTACTTCACCTTGCTTCTCTCATTAAACTCTCTTATTCTCTTTTTTCCATGTTGTTACTCACTTGATGAACAAGGCCAAGCTCTTGTAGCATGGAAAAACAGTTTAAACAGCACAGTGGATGCATTAGCATCATGGAATCCTTCAGCCTCAAGCCCATGCAACTGGTTTGGGGTGTATTGCAACTCACAAGGAGATGTGGTAGAGATAAACCTGAGATCAGTGAACTTGCAAGGCTCATTGCCTTCAAATTTTCAACCTCTAAGGTCCTTGAAGATTCTTGTCCTCACATCAACCAACATCACAGGAAGGATTCCAAAAGAGATTGGAGACTATCAAGAGCTCATCTTTATTGATCTTAGTGGGAATTCTCTCTTTGGTGAAATCCCACAAGAAATTTGCAGCCTAAGGAAACTACAAAGTTTGTCTCTACATACAAATTTCCTTGAAGGCAGCATTCCATCCAACATTGGAAATCTATCAAGTCTTGTGAACTTGACACTCTACGATAATCAACTCAGTGGTGAAATTCCAAAGAGCATTGGCGTTTTAAGCAAGCTTGAAGTCATTAGAGCTGGTGGCAATAAGAACCTCAAGGGTGAGATCCCATGGGAGATTGGAAACTGCACCAACTTGGCTATGTTAGGCCTTGCAGAAACCAGCATTTCAGGGAGCCTTCCTTCTTCAATCAAAATGTTGACAAGAATCAAGACCATAGCCATTTACACTACTCTATTATCAGGTCCCATTCCAGAAGAGATTGGCAATTGCAGTGAGTTGCAGAACCTGTACTTGTATCAAAACTCTATCTCAGGTTCAATTCCAAGCCAAATTGGAGGACTCAGCAATCTTAAGAGTCTTCTTTTATGGCAAAACAATCTAGTAGGTACAATCCCTGAAGAACTTGGAAGCTGCTCAGAAATCGAAGTCATAGATTTATCAGAAAACCTTCTCACAGGTAGCATACCAAGTAGTTTTGGTAAGCTTTCAAATCTTCAAGAGCTTCAACTGAGCGTGAATCAGCTCTCAGGTATAATCCCTCCTGAGATTTCAAATTGCATTTCTCTGACACAACTTGAAGTAGATAACAATGCTCTCTCTGGTGAGATTCCTGATCTTATTGGCAACTTGAAAGGCTTAACTCTGTTCTTTGCATGGCAGAACAAGCTAACAGGGAAAATCCCAGATAGTCTTTCTGAGTGCCAGGAACTTCAGGCACTTGATCTTTCTTACAACAACTTGATTGGTCCAATACCCAAACAACTATTTGGGTTGAGAAACCTCACCAAATTGCTGCTTCTTTCCAATGATTTATCAGGCTTTATACCACCTGATATAGGAAATTGCACAGGTCTCTACAGGCTGAGGTTGAATCATAATAGACTTGCAGGTAACATTCCACCTGAAATTGGAAACTTGAAGAGTTTGAATTTTGTGGACATTAGCAACAATCATCTTGTAGGAAAGATTCCTCCAACACTATCTGGATGCCAGAATCTTGAGTTTCTAGATCTTCATTCCAATAGTCTCACAGGTTCTATTCCAGATTCTCTTCCAAAAAGCCTTCAGTTGATTGACTTCTCAGATAACAGGTTAACAGGTTCACTGAGTCACGCCCTTGGTTCATTGGTTGAGTTAACCAAACTCAACCTGGGAAAGAACCGGTTAAGTGGAAGAATCCCAGAAGAGATCTTGTCTTGCACCAAGCTTCAACTTCTAGACTTGGGAAGCAATAGTTTCACTGGAGAAATTCCCAAGGAAGTTGGTCTAATTCCCTCCTTGGAAATCTCTCTCAATCTTAGTTGCAACCAGTTTTCTGGTCAAATTCCTTCCCAGTTCTCTAGCCTTAGCAAGCTAGGAGTGCTTGATCTCTCACACAACAAGCTCTCAGGGAATTTAGATGCTCTTTATGACCTTGAGAATCTTGTTTCCTTAAATGTTTCCTTCAATGGTTTCTCTGGTGAGTTGCCTAACACTCCATTCTTCCATAAACTCCCTCTTAGTGATCTTGCTGAAAATGAAGGTCTCTACATTGCTGGAGGTGTTGCAACTCCTTCTGACAGAATGGCAAAAAGTCATGCCAAATCAGCCATGAAGTTCATTATGTCCATTCTCATGAGCACCAGTGCAGTACTAGTGCTACTCACAATCTATGTCTTGGTTCATGCTCACAAGGCCAACAAGGTGGTCATGGACAACGAAAATTGGGACATGACTTTGTATCAGAAACTTGATTTTTCCATTGATGACATTATCTTGAATTTGACATCATCCAATGTGATTGGCACTGGAAGCTCAGGAGTTGTGTACAAAGTGACCATTCCAAGTGGTGAAACACTAGCAGTTAAAAAGATGTGGTCATCAGAAGAGTCTGGTGCATTCAGTTCAGAAATTCAAACATTGGGGTCAATTAGACACAAGAATATCATTAGGCTTCTAGGTTGGGGATCCAACAAGAACCTGAAGCTTCTGTTTTATGATTACCTCCTCAATGGAAGTTTGAGCTCATTGCTTCATGGTTCAGGAAAAGGAAAAGCTGAATGGGAGACAAGATATGATGTTATATTAGGTGTGGCACATGCACTTGCATATTTGCACCATGATTGTGTGCCTGCTATAATTCATGGAGATGTCAAAGCCATGAATGTACTATTAGGTCCTGGATATCAACCATACCTTGCTGACTTTGGCTTGGCAAGAGTTGCAATTGAGAATTGTGACAGTACTAATTCCAAGCCAATTCAAAGACATTACCTTGCTGGTTCATATGGATACATGGCTCCTGAACATGCATCAATGCAACCTATCACTGAGAAAATTGACGTGTACAGTTTTGGTATGGTTCTACTTGAGATTCTCACAGGAAGGCACCCTTTAGACCCGACTCTACCAGGGGGTGCAAACTTGGTTCAATGGGTTAGGAACCACTTAGCTAGCAAAGGAGACCCTTCAGATATTCTTGACACAAAGCTAAGAGGGAGGGATGACCCCACCATGCATGAAATGTTACAAACTCTAGCAGTGTCATTTTTATGTGTAAGTACTAGAGCTGATGACCGTCCTACAATGAAAGATGTTGTTGCAATGCTCAAGGAAATTAGACCTCTTGAGACATCAAGGTCAGATACTGATCTATTGAAGGGAGGTTTAATAGCACATAGTTCTCCACCACCTCCTAAGAATGTGGTTTCACATGGATCTTCTTCATGTTCCTATAATTTCTCAGAAAATTCTATTAGTTGA 3285 0.4091 MPGSLRNLSLSPKIFYFTLLLSLNSLILFFPCCYSLDEQGQALVAWKNSLNSTVDALASWNPSASSPCNWFGVYCNSQGDVVEINLRSVNLQGSLPSNFQPLRSLKILVLTSTNITGRIPKEIGDYQELIFIDLSGNSLFGEIPQEICSLRKLQSLSLHTNFLEGSIPSNIGNLSSLVNLTLYDNQLSGEIPKSIGVLSKLEVIRAGGNKNLKGEIPWEIGNCTNLAMLGLAETSISGSLPSSIKMLTRIKTIAIYTTLLSGPIPEEIGNCSELQNLYLYQNSISGSIPSQIGGLSNLKSLLLWQNNLVGTIPEELGSCSEIEVIDLSENLLTGSIPSSFGKLSNLQELQLSVNQLSGIIPPEISNCISLTQLEVDNNALSGEIPDLIGNLKGLTLFFAWQNKLTGKIPDSLSECQELQALDLSYNNLIGPIPKQLFGLRNLTKLLLLSNDLSGFIPPDIGNCTGLYRLRLNHNRLAGNIPPEIGNLKSLNFVDISNNHLVGKIPPTLSGCQNLEFLDLHSNSLTGSIPDSLPKSLQLIDFSDNRLTGSLSHALGSLVELTKLNLGKNRLSGRIPEEILSCTKLQLLDLGSNSFTGEIPKEVGLIPSLEISLNLSCNQFSGQIPSQFSSLSKLGVLDLSHNKLSGNLDALYDLENLVSLNVSFNGFSGELPNTPFFHKLPLSDLAENEGLYIAGGVATPSDRMAKSHAKSAMKFIMSILMSTSAVLVLLTIYVLVHAHKANKVVMDNENWDMTLYQKLDFSIDDIILNLTSSNVIGTGSSGVVYKVTIPSGETLAVKKMWSSEESGAFSSEIQTLGSIRHKNIIRLLGWGSNKNLKLLFYDYLLNGSLSSLLHGSGKGKAEWETRYDVILGVAHALAYLHHDCVPAIIHGDVKAMNVLLGPGYQPYLADFGLARVAIENCDSTNSKPIQRHYLAGSYGYMAPEHASMQPITEKIDVYSFGMVLLEILTGRHPLDPTLPGGANLVQWVRNHLASKGDPSDILDTKLRGRDDPTMHEMLQTLAVSFLCVSTRADDRPTMKDVVAMLKEIRPLETSRSDTDLLKGGLIAHSSPPPPKNVVSHGSSSCSYNFSENSIS* 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1716 1094 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 1060 - -
Apr10g1716 1094 Gene3D Transferase(Phosphotransferase) domain 1 843 1061 - -
Apr10g1716 1094 ProSitePatterns Protein kinases ATP-binding region signature. 775 798 IPR017441 GO:0005524
Apr10g1716 1094 Pfam Leucine Rich Repeat 486 511 IPR001611 GO:0005515
Apr10g1716 1094 SUPERFAMILY Protein kinase-like (PK-like) 766 1044 IPR011009 -
Apr10g1716 1094 SMART serkin_6 769 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1716 1094 Gene3D Ribonuclease Inhibitor 533 610 IPR032675 -
Apr10g1716 1094 Gene3D Ribonuclease Inhibitor 611 694 IPR032675 -
Apr10g1716 1094 Gene3D Ribonuclease Inhibitor 334 432 IPR032675 -
Apr10g1716 1094 Gene3D Ribonuclease Inhibitor 433 532 IPR032675 -
Apr10g1716 1094 Gene3D Ribonuclease Inhibitor 36 194 IPR032675 -
Apr10g1716 1094 Pfam Protein kinase domain 772 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1716 1094 MobiDBLite consensus disorder prediction 1074 1094 - -
Apr10g1716 1094 Gene3D Phosphorylase Kinase; domain 1 735 842 - -
Apr10g1716 1094 ProSiteProfiles Protein kinase domain profile. 769 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1716 1094 ProSiteProfiles Leucine-rich repeat profile. 632 654 IPR001611 GO:0005515
Apr10g1716 1094 Gene3D Ribonuclease Inhibitor 197 333 IPR032675 -
Apr10g1716 1094 Pfam Leucine rich repeat 611 665 IPR001611 GO:0005515
Apr10g1716 1094 Pfam Leucine rich repeat 322 380 IPR001611 GO:0005515
Apr10g1716 1094 SUPERFAMILY RNI-like 83 381 - -
Apr10g1716 1094 SUPERFAMILY L domain-like 611 687 - -
Apr10g1716 1094 MobiDBLite consensus disorder prediction 1065 1094 - -
Apr10g1716 1094 PRINTS Leucine-rich repeat signature 418 431 - -
Apr10g1716 1094 PRINTS Leucine-rich repeat signature 630 643 - -
Apr10g1716 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 887 899 IPR008271 GO:0004672|GO:0006468
Apr10g1716 1094 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Apr10g1716 1094 SMART LRR_typ_2 512 535 IPR003591 -
Apr10g1716 1094 SMART LRR_typ_2 295 319 IPR003591 -
Apr10g1716 1094 SMART LRR_typ_2 557 581 IPR003591 -
Apr10g1716 1094 SMART LRR_typ_2 487 511 IPR003591 -
Apr10g1716 1094 SMART LRR_typ_2 150 174 IPR003591 -
Apr10g1716 1094 SMART LRR_typ_2 630 653 IPR003591 -
Apr10g1716 1094 SMART LRR_typ_2 343 367 IPR003591 -
Apr10g1716 1094 SMART LRR_typ_2 439 463 IPR003591 -
Apr10g1716 1094 SUPERFAMILY RNI-like 288 609 - -
Apr10g1716 1094 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 1060 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1716 Apr-Chr10 29990054 29993744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1716 33 1093 Receptor kinase-like Gene Family AT5G56040 67.664 0.0 1436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr10g1716 Pkinase 2.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1716 - - gmx:100802880 1873.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0690 7 13740038 13748001 Apr10g1716 10 29990054 29993744 PCT