Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1706 ATGGAAGTTGGGAGAGAAGATGAGATTGTGGACATGTCAATGTCACCCCAATTAGTTGGTTCCATTAACAGTGACTTTTGTCACAAGAAGGAGTTTATGTCTCAAGCATACCTTCAAAATAGGTACTCAGAGATTGACATAGAAATTGAAGATTCCAATTTCAAACAAAGTTGTCCCCTCCCCATATTTCTCAAGTTTGAAGATGTAGAGTACAAGGTGAGAAATAGCCTAGCAGACTCTAATAACCCTGTGAAGATAATGGTGTCAAAGGTAGCCACACAACTCAATGTGGAAGAAGATAGATACAAGAAAATTTTGAAAGGCATCACAGGAAGCATTGGGCCTGGTGAAATTCTTGCTCTAATGGGTCCTTCTGGCAGTGGCAAGACAACCTTATTGAGAGTTATAGGAGGAAGATTGCGTAACAATGTAAAGGGAAAAATAACTTATAATGATGTTTGTTATACTCCAGCCATCAAGAGGAGGATTGGATTTGTGGCACAAGAGGATGTGCTTTTCCCACAATTAACTGTAGAAGAAACATTAGTCTTCTCAGCACTCTTGAGGCTTCCAACCAATATGAGCAAGCAACAAAAATATGCAAAAGTGGAGACTACTATCAAGGAGTTAGGCCTTGAAAGATGTCGCCACACAAAAATAGCTGGAGGATTTCTCAAAGGCATATCAGGAGGAGAAAGGAAAAGAACTAGCATTGGCTATGAAATTCTTGTTGATCCTTCGTTGTTGCTACTTGATGAACCAACTTCTGGCCTTGATTCCACCTCAGCAAACAAACTCCTTCTCACTCTTCAAGGACTTGCTAAGGCTGGAAGGACCATAATCACAACAATACACCAACCATCAAGCAGAATCTTTCACACGTTTGATAAACTTCTTCTAATATCAGAAGGGTATCCTATTTACTATGGCAAGGCTAGAGAAACAATGGCATACTTTTCATCCTTGAGGTTCATCCCAGAAATACCAATGAATCCTGCAGAATTCTTGCTTGACTTAGCAACGGGACAAGTTAATGACATAAGTGTTCCAACAGACATTGTACAAGACCATGAATCTGATAACCTTTCAAAAGTTGTTATCAAATATCTACAATTCAAGTACAAAACTTTACTCGAGTCGAAGGAAAAGGAAGAGAACCATAGAACAACAAACACACCAGAACATCTTCAACTAGCCATTCAAGTTAAGAAGGAGTGGACATTGAGTTGGTTGGACCAGTTTGTGATTGTTTCAAGGAGAACATTCAAAGCTAGATGCAAGGACTATTTTGATAAGTTAAGACTAGTTCAAGCACTTGGAGTTGCACTTTTATTGGGGCTCCTTTGGTGGAAATCTTCAATCAATACTGAGGCTCAACTTAGAGATCAAGTTGGTTTAGCATTCTACATGTGTATATTTTGGACCTCTTCATGTATTTTTGGAGCAGTTTATGTCTTTCCATTTGAAAAGTACTACTTGATAAAAGAAAGGAAAGCTGACATGTATAGATTAAGTGTATACTATGCATGCAGCACTTTGTGTGATATGGTGGCACATGTTTTCTATCCAACTATTTTCATGGTCATCTTGTACTTCATGGCTGGCTTTAAGAGGACTGTTGCTTGTTTCTTCTTGACACTATTTACTATTTTGTTAATAGCTATAACAAGTCAAGGAGCAGGAGAATTGTTTGGAGCAGCAGTTATGAGTATTAAAAGTGCAGGGATGACTGCTTCTTTGATACTAATGTTGTTTCTTCTTACAGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGGGGTGGTTGAAGTATTTGTCATTTATGTACTATGGTTTTAGGCTTCTTCTGAAGGTGCAATATTCAGGTGACCAACTATATGATTGTGAAAGCAAAAGAGGGTGTAGAACACTACAAAGTTCACCTACATTTGACAATGTAAACTTGAAAGGTGGATTAAAAGAAGTGTGGATTCTACTAGCCATGGCCCTATGCTTCCGGTTATTAGCTTACTTCTGCCTTCGTAGAAGAATTGATGTTCGCAACTAA 2049 0.3856 MEVGREDEIVDMSMSPQLVGSINSDFCHKKEFMSQAYLQNRYSEIDIEIEDSNFKQSCPLPIFLKFEDVEYKVRNSLADSNNPVKIMVSKVATQLNVEEDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLRNNVKGKITYNDVCYTPAIKRRIGFVAQEDVLFPQLTVEETLVFSALLRLPTNMSKQQKYAKVETTIKELGLERCRHTKIAGGFLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLLTLQGLAKAGRTIITTIHQPSSRIFHTFDKLLLISEGYPIYYGKARETMAYFSSLRFIPEIPMNPAEFLLDLATGQVNDISVPTDIVQDHESDNLSKVVIKYLQFKYKTLLESKEKEENHRTTNTPEHLQLAIQVKKEWTLSWLDQFVIVSRRTFKARCKDYFDKLRLVQALGVALLLGLLWWKSSINTEAQLRDQVGLAFYMCIFWTSSCIFGAVYVFPFEKYYLIKERKADMYRLSVYYACSTLCDMVAHVFYPTIFMVILYFMAGFKRTVACFFLTLFTILLIAITSQGAGELFGAAVMSIKSAGMTASLILMLFLLTGGYYVQHIPKFMGWLKYLSFMYYGFRLLLKVQYSGDQLYDCESKRGCRTLQSSPTFDNVNLKGGLKEVWILLAMALCFRLLAYFCLRRRIDVRN* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1706 682 SMART AAA_5 115 313 IPR003593 -
Apr10g1706 682 CDD ABCG_EPDR 87 310 - -
Apr10g1706 682 Pfam ABC-2 type transporter 413 621 IPR013525 GO:0016020|GO:0140359
Apr10g1706 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 5 678 - -
Apr10g1706 682 Pfam ABC transporter 106 256 IPR003439 GO:0005524
Apr10g1706 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 678 - -
Apr10g1706 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 321 IPR027417 -
Apr10g1706 682 Gene3D - 86 323 IPR027417 -
Apr10g1706 682 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 86 328 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1706 Apr-Chr10 29920685 29923821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1706 104 289 Calmodulin-binding Proteins AT2G36910 28.230 8.26e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1706 K05681 - gmx:100806094 1162.9