Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1697 ATGGTTTGCACTGCCAATGATTTACAAGAATGGAAAGATTTTCCCAAAGGGCTCAAGGTTCTTCTCCTTGAGGGAGACAGAACTTCTGCTGCCGAGATAAGAGCAAAGCTTGAGGCCATGGACTATAATGCCTTGTCAGCAATCTCAAGTGGACCTGAAAGCTTCCACATTGCCATAGTGGAGGTGAGTTCAAGCAGCCAGGGAGGTTTCAAATTTCTTGAGAATGCCAAGGACTTGCCAACCATTATGACTTCTAACAATCATTGCCTGAACACCATGATGAAGTGCATAGCGCTTGGTGCAGTTGAGTTCCTCAACAAACCACTCTCCGAGGACAAGCTCAGAAATATCTGGCAGCATGTGGTTCACAAGGCATTCAGTGCTGGGGAAAGCATCCTGTCTGAATCACTAAAACCAATCAAAGAAACTGTAATGGCCAAGTTGCAAACAGACAACGAACAACATGAAGGTAGAGTCTCTGAAAATGGATCCAGGTTTACTGATAATGACGACCATGAGCAGTCTCCTGGAAATGATAAATATCCAGCTCCTTCAACCCCACAATTGGAACAAGGGACAAGATTGTTGGATGATGGTGATTGCCAAGAGCAGACTAATTGCTCAACAGAAAAAGAAAGTGGGGGGGAACATGATGGAGAATCTAAATTTGTCGAAACTACATGTGGAAATTTGAATGCTGAAAGTACTCCTCAACAAAGGAAATCCGAAAGCACTTCGGTTAAGGATGAAGAGGATTTTGCTGATGCTTCCAAGAATGAGAGTATTGCTTCTCCACATACTCAAAATACAAAAGGTGTCAGCAACATTGAAAGACATACAACATCTTCAAATAAAGTAGGCATTCATGGTGATTCATATGAAATAAAAATTAATCGCAAAAAGATGAAAGTAGACTGGACGCCTGAGCTGCACAAAAATTTTGTGAAGGCAGTGGAACAACTAGGCATTGATCAAGCCATTCCTTCTCGAATATTGGAATTAATGAAGGTGGAGGGCTTGACAAGGCATAATGTGGCAAGCCATCTTCAGAAGTATAGAATGCATAAGAGACATATCTTGCCCAAGGAAGATGATCGTAAATGGTTGAATCAAAGAGATACAATGCAAAGGAGTTATTGTCTTCAAAGACCAATTATGGCCTTTCCTCCATATCATTCTAATCACACCCTTTCTCTGGCTCCTGTATATCCTATGTGGGGACAATCTGGCAATCAAACAGCTGGCATGCATATTTGGCACCCTCCTGGTTATCCCTTGTGGCAGCAGCCTACCGAAAATTGGCAATGGAAACCGTTTCCAGGGATGCATGCAGATGCATGGGGCTGCCCAGTGTTACCAGTACAGCCTCCTCAAGCTCCTTGCTTTCCCTACTCTTCGAATATGCCTGCATTGCTCAATGCTGATGCAGTGGATCACACGTGTAGCATGCCACAAAGTTCTGTCGAGCATTATCCGGCAGAAGAGGTAGTTGACAAAGTTGTGAAAGAGGCAATAAACAAGCCATGGCTACCCTTGCCTTTGGGCCTCAAACCTCCTTCCACAGATAGTGTGATGGCTGAGCTTTCAAGGCAAGGCATTTCCAGCATTCCTCCTGCCACCAAGGGTTCTAATTCTGGCTGA 1641 0.4394 MVCTANDLQEWKDFPKGLKVLLLEGDRTSAAEIRAKLEAMDYNALSAISSGPESFHIAIVEVSSSSQGGFKFLENAKDLPTIMTSNNHCLNTMMKCIALGAVEFLNKPLSEDKLRNIWQHVVHKAFSAGESILSESLKPIKETVMAKLQTDNEQHEGRVSENGSRFTDNDDHEQSPGNDKYPAPSTPQLEQGTRLLDDGDCQEQTNCSTEKESGGEHDGESKFVETTCGNLNAESTPQQRKSESTSVKDEEDFADASKNESIASPHTQNTKGVSNIERHTTSSNKVGIHGDSYEIKINRKKMKVDWTPELHKNFVKAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRHILPKEDDRKWLNQRDTMQRSYCLQRPIMAFPPYHSNHTLSLAPVYPMWGQSGNQTAGMHIWHPPGYPLWQQPTENWQWKPFPGMHADAWGCPVLPVQPPQAPCFPYSSNMPALLNADAVDHTCSMPQSSVEHYPAEEVVDKVVKEAINKPWLPLPLGLKPPSTDSVMAELSRQGISSIPPATKGSNSG* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1697 546 MobiDBLite consensus disorder prediction 521 546 - -
Apr10g1697 546 MobiDBLite consensus disorder prediction 179 209 - -
Apr10g1697 546 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 544 IPR044825 GO:0003700|GO:0045893
Apr10g1697 546 MobiDBLite consensus disorder prediction 524 546 - -
Apr10g1697 546 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 298 357 IPR017930 -
Apr10g1697 546 SUPERFAMILY Homeodomain-like 299 358 IPR009057 -
Apr10g1697 546 ProSiteProfiles Response regulatory domain profile. 19 122 IPR001789 GO:0000160
Apr10g1697 546 Gene3D - 297 359 - -
Apr10g1697 546 Gene3D - 15 128 - -
Apr10g1697 546 PANTHER TWO-COMPONENT RESPONSE REGULATOR-APRR2-LIKE PROTEIN 1 544 - -
Apr10g1697 546 MobiDBLite consensus disorder prediction 260 287 - -
Apr10g1697 546 MobiDBLite consensus disorder prediction 149 287 - -
Apr10g1697 546 MobiDBLite consensus disorder prediction 243 257 - -
Apr10g1697 546 Pfam Myb-like DNA-binding domain 304 353 IPR001005 -
Apr10g1697 546 MobiDBLite consensus disorder prediction 225 242 - -
Apr10g1697 546 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 301 356 IPR006447 GO:0003677
Apr10g1697 546 MobiDBLite consensus disorder prediction 149 177 - -
Apr10g1697 546 SUPERFAMILY CheY-like 16 127 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1697 Apr-Chr10 29810818 29817966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1697 1 540 Response Regulator Gene Family AT4G18020 46.543 4.22e-131 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr10g1697 Myb_DNA-binding 2.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1697 - - gmx:100777535 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0767 7 14619216 14625714 Apr10g1697 10 29810818 29817966 PCT