Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1691 ATGGGTTGCTTACACTCCAAAACCGCTCATCTTCACTCTCCTGAGGACCCTTCCACTGCCTTACCCGAGTCCAAGAAACCCGATCCAGAGAATGGTGGGGATGATGTTGATCAAGAGTGTCAGGTTTCAGCATTCAAAGAGTACGGTTTGAGTGAACTCCGAAGGGCCACAAATGAGTTCAGCACAGATTACATTGTCTCTGAGAGTGGTGAGAAAGCTCCCAATGTGGTATACAGAGGGAAGCTTGAGAACAATCGCTTAGTTGCTGTCAAACGCTTCTCCAAACTCTCTTGGCCTGATGCTCAACAGTTCATGGCAGAGGCAGCTGGAGTTGGGAAAGTAAGGCACAAGAGACTGGTGAATCTAATTGGTTGTTGTGCTGAAGGAGATGAAAGGCTCTTGGTAGCTGAGTACATGCCCAATGATACTTTGTCCAAGCATCTCTTTCATTGGGACAAGCAACCATTACCATGGGAAATGCGTGTTAGAGTTGCATACCATGTTGCCCAGGCACTAGATCATTGTAGCATGGAAAACCGGAAAATATATCATGATCTGAATGCATATAGGATTCTTTTTGATGAGGATGGTGATCCCCGCTTATCTAGTTTTGGGCTTATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACTAATTTAGCTTATACTCCACCTGAATTTTTGCGAACAGGCAGGATAATCCCAGAGAGTGTGATCTACAGTTATGGAACTGTTCTTTTGGATCTTTTGAGCGGCAAGCATATTCCTCCAAGCCATGCTTTGGACCTAATTAGAGGGAAAAATGCTTTGTTGTTGATGGACTCTTCCTTAGAAGGACAATATGCAAATGATGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAATGTCTTCAGTTTGAGGCCAGAGAAAGACCTGATATTAAGTTTCTTCTTACTGCCGTTACACCTCTTCAAAAGCAGAAAGAGGTAGCATCTCATGTGTTAATGGGTCTAACTAAAAACACAGCAGTGCTACCAACCATGCTTTCTCCTCTTGGAAAGGCCTGTGCAAGAATGGATCTTACTGCTGTGCATGATATATTGTTAAAAACAGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGCTTTCGTTCCAAGAATGGACACAACAAGTGCAAGATATCTTGAACACAAAGAAATTTGGGGATATTGCATTCAGAGACAAGGATTTCAAAAATGCGATTGAGTATTATTCTAAGTTGGTGGTTATGATGTCTGTTCCCTCGGCTACCGTCTTTGCAAGGCGAGCCTTCTCCTACTTAATGAATGATCAAGCAGAACTTGCGTTAAGGGACGCCATGCAAGCGCAGGTATGCATACCTGATTGGCCAACTGCATTTTACCTGCAGGCTCTTGCTCTCTCCAAGCTGGGAATGGAAACTGATGCACATGACATGCTTAGTGATGGAGCCGCCTTCGAAGCTAAGAGATCTAACAGCTGGCGCGGTTAA 1491 0.4366 MGCLHSKTAHLHSPEDPSTALPESKKPDPENGGDDVDQECQVSAFKEYGLSELRRATNEFSTDYIVSESGEKAPNVVYRGKLENNRLVAVKRFSKLSWPDAQQFMAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNALLLMDSSLEGQYANDDATKLVELASKCLQFEARERPDIKFLLTAVTPLQKQKEVASHVLMGLTKNTAVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAHDMLSDGAAFEAKRSNSWRG* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1691 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 495 - -
Apr10g1691 496 MobiDBLite consensus disorder prediction 1 37 - -
Apr10g1691 496 SUPERFAMILY Protein kinase-like (PK-like) 49 315 IPR011009 -
Apr10g1691 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 495 IPR045845 GO:0004672|GO:0009742
Apr10g1691 496 Gene3D Phosphorylase Kinase; domain 1 34 138 - -
Apr10g1691 496 SUPERFAMILY TPR-like 387 483 IPR011990 GO:0005515
Apr10g1691 496 Gene3D Tetratricopeptide repeat domain 386 494 IPR011990 GO:0005515
Apr10g1691 496 ProSiteProfiles Protein kinase domain profile. 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1691 496 Gene3D Transferase(Phosphotransferase) domain 1 140 332 - -
Apr10g1691 496 Pfam Protein tyrosine and serine/threonine kinase 76 311 IPR001245 GO:0004672|GO:0006468
Apr10g1691 496 MobiDBLite consensus disorder prediction 19 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1691 Apr-Chr10 29713699 29718908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1691 14 314 Glycoside Hydrolase AT3G07070 33.538 1.15e-42 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Apr10g1691 PK_Tyr_Ser-Thr 1.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1691 K14500 - gmx:100793576 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1691 10 29713699 29718908 Apr10g1691 10 29713699 29718908 ECH