Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1689 ATGGGAAGTGGAGTTTCGAGCCTCTGTTCGTGCTTCGAACCGGTGAACCGGACAAACGAACCGGTCCACCAAGACGTGATATTCACAGCCACGGAGCCATTGGACGAAACCCTAGGCCATTCCTTCTGCTACGTCAGATCCTCCGCTCGATTCCTCTCTCCCACTCACTCCGATCGCTTCCTCTCTCCTTCCACTTCCCTCCGTTTCTCCCCGACCCATGAGCCCCGAATCCGACCCGAATTTCATGAAACCGGATTTAAAGCCATTTCCGGAGCCTCCGTTAGTGCTAACAGTTCCGTCCCCAAAACCGTTATTCAGTTAGACGACGATGCAGCCGATTGCGTTGGAGCCTCCTCCAAGGGCAATCTCGTCAATGGCTTCGAAAGCACGTCGTCGTTTAGCGCTCTCCCGCTTCAGCCGGTGCCCCGCGGCGGCGAACCCTTCGAGGGGAGCGGTTTCTTCCTCTCCGGTCCAATTGAGAGCAACGCCCTCTCCGGGCCGCTCAACGCCGGCTCCGCCGCCGACGGTGGCGAGGTTCCGTTCTCGGCGCCGCTGGGAGGGCTCTATGGAAAGAAGAAGAAGAAGAAGAAAGGGATTTCGGGGTTCCAGAAGGCGTTTCACCGGAACTTGTCGGAGAAGAAGCGGCCGTGGGTGGTTCCGGTGTTGAACTTCGTCGGCAGGAAGGAGGTTCCGGTGAGCGAGGGGAAGCCGGCGGCGGAGGCGAGGATCGAGAGCAATGTGCAGTGGGCGTTGGGGAAGGCAGGGGAGGATCGGGTTCACGTGGTGGTGTCGGAGGAGCAAGGGTGGTTGTTCGTTGGGATTTACGACGGTTTCAACGGCCCCGACGCGCCGGAGTTTCTGATGGGTCACCTTTACCGCGCAGTTCACAACGAGCTTCAGGGTCTGTTCTGGGAAGTTGAAGAAGAAGAAGCACAAGAAGGAAATCCCGTAGCGGAGAGTGCTGAAGTGAAAAACAGTGAGGTAGAAGATTCAACTTCTAGTTCTGCCAAGAAGGTAGAAGGAACGGAGAGTAAACGTCGGAGGCTGTGGGAGCTTCTGGCCGAAGACCCTGAAGATGGACTCGATCTTTCGGGTTCGGATAGGTTTGCTTTTTCCGTTGATGATGCACTGAGCGTTAACAATGCCAATGCGGGTTCTGCTGTGAGTAGAAGGTGGCTGTTGCTGTCGAAATTGAAGCACGGGTTGTCTAAGCATAAGGAGGGTCATGGGAGGAAGTTGTTGCCGTGGAGTTTGGGGGCGGAGGAGAAAGAGAAGATGGAGGTTGAGAATCGAGCGGAGGATAAGCCTTGTGGTGGTGACGATGGTGGTGGTGTTGGTGTTGGTGGGAGGAAGAGGAAAGTGGGTCCCGTGGATCATGATCTGGTTTTGAGTGCAATGTCTCGGGCGCTCCAAGTGACGGAGCTTGCGTATTTGGATATGACGGATAAGCTTCTGGGTACGAATCCGGAACTTGCTTTGATGGGTTCGTGTCTTTTGGTTGTTGTGATGAGGGATGAGGATGTGTACGTGATGAATGTTGGGGATAGCCGTGCTATTGTTGCACACTATGAGCCCAAGGAGATTAATTCTAATGCGGGAGATGTTGGATCCAGCACCGAGAGCATAGTTGAAGAGTCATTGGCTTTAGGTGAAAGTGGAAATGCAATCACGTTGGGGAATGAAGGTCCTGCTCAAGAAATGAGGTTGGTCGCGTTGCAGCTGTCAACTGACCACAGCACCAGCATTGAAGAAGAAGTCATTAGAATTAAAAATGAGCATCCTGATGATACCCAATGTATAGTCAATGATAGAGTTAAGGGTCGTCTTAAGGTCACCAGAGCATTTGGGGCTGGATTTTTGAAACAGCCAAAGTGGAATGATGCAGTACTAGAGATGTTTCGTAATGAATATATTGGCACTACTCCATATATATCTTGCTCTCCTTCACTACGTCACCATAGATTATGCCAGAGAGATCAGTTTTTGATCCTCTCATCTGATGGTTTATATCAATATTTAAACAATGAAGAAGTGGTTTCTCATGTTGAGAGCTTCATGGAAAAATTTCCAGAAGGAGATCCTGCCCAACATTTAATTGAAGAGCTGCTCCTCCGTGCTGCTAAGAAGGCTGGAATGGATTTTCATGAATTGCTGGATATCCCACAAGGAGATCGGAGGAAGTATCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCATCAGGGAAGTATCCGTGA 2256 0.512 MGSGVSSLCSCFEPVNRTNEPVHQDVIFTATEPLDETLGHSFCYVRSSARFLSPTHSDRFLSPSTSLRFSPTHEPRIRPEFHETGFKAISGASVSANSSVPKTVIQLDDDAADCVGASSKGNLVNGFESTSSFSALPLQPVPRGGEPFEGSGFFLSGPIESNALSGPLNAGSAADGGEVPFSAPLGGLYGKKKKKKKGISGFQKAFHRNLSEKKRPWVVPVLNFVGRKEVPVSEGKPAAEARIESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHNELQGLFWEVEEEEAQEGNPVAESAEVKNSEVEDSTSSSAKKVEGTESKRRRLWELLAEDPEDGLDLSGSDRFAFSVDDALSVNNANAGSAVSRRWLLLSKLKHGLSKHKEGHGRKLLPWSLGAEEKEKMEVENRAEDKPCGGDDGGGVGVGGRKRKVGPVDHDLVLSAMSRALQVTELAYLDMTDKLLGTNPELALMGSCLLVVVMRDEDVYVMNVGDSRAIVAHYEPKEINSNAGDVGSSTESIVEESLALGESGNAITLGNEGPAQEMRLVALQLSTDHSTSIEEEVIRIKNEHPDDTQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDAVLEMFRNEYIGTTPYISCSPSLRHHRLCQRDQFLILSSDGLYQYLNNEEVVSHVESFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1689 751 ProSiteProfiles PPM-type phosphatase domain profile. 240 739 IPR001932 -
Apr10g1689 751 PANTHER PROTEIN PHOSPHATASE 2C 19 749 IPR015655 GO:0004722|GO:0006470
Apr10g1689 751 SUPERFAMILY PP2C-like 252 740 IPR036457 -
Apr10g1689 751 CDD PP2Cc 458 739 IPR001932 -
Apr10g1689 751 MobiDBLite consensus disorder prediction 428 450 - -
Apr10g1689 751 Pfam Protein phosphatase 2C 572 707 IPR001932 -
Apr10g1689 751 SMART PP2C_4 240 737 IPR001932 -
Apr10g1689 751 PANTHER PROTEIN PHOSPHATASE 2C 29 19 749 - -
Apr10g1689 751 MobiDBLite consensus disorder prediction 310 341 - -
Apr10g1689 751 Gene3D - 232 746 IPR036457 -
Apr10g1689 751 MobiDBLite consensus disorder prediction 323 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1689 Apr-Chr10 29679457 29685670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1689 1 750 PP2C-type Phosphatase Gene Family AT2G35350 58.477 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1689 - - mtr:MTR_4g098650 1089.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1689 10 29679457 29685670 Apr10g1689 10 29679457 29685670 ECH
Apr7g0777 7 14713759 14718793 Apr10g1689 10 29679457 29685670 PCT