Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1661 ATGGAGGAACGATATGAGTCATTGAAGGACCTTGGTTCTGGGAATTTTGGAGTGGCCAAGTTGGCTAAAGATAAGAAAACTGGAGAGCTTGTTGCGGTTAAATACATAGAGAGAGGGAAAAAGATCGATGAAAATGTTCAGAGGGAGATAATTAATCACCGATCTTTAAGGCATCCAAATATAATCAGGTTTAAAGAGGTCTTGCTGACCCCTACTCATTTAGCTATCGTCTTGGAGTTTGCTTCAGGCGGTGAACTCTTTGAAAGGATATGTAATGCTGGTCGATTTAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAGCTAATATCTGGGGTTAGCTATTGTCATTCAATGTCTGCTTTACTGCACTCTCAACCTAAATCAACAGTTGGAACTCCTGCATACATTGCTCCAGAGGTTCTATCGCGGAAGGAGTATGATGGAAAGATTGCAGATGTTTGGTCTTGTGGTGTGACTCTTTATGTCATGTTAGTTGGTGCATACCCATTTGAAGATCCAGAAGATCCTAGAAATTTCAGAAAGACTATTGGGAGAATAATTGGTGTTCAGTACTCCATACCCGACTATGTTCGTGTTTCTTCAGAGTGTAGGAACCTTCTCTCTCGTATTTTTGTTGCTGATCCTGCCAAGAGGATCACCATCCCAGAGATAAAACAGAATCCTTGGTTCTTGAAGAATTTGCCCAAAGAGATCATTGAAGCTGAGAGAAAAGGTTATGAGGAATCAAAGCAAGACCAACCAAGCCAGAGGGTGGAAGAAATCATGAGGATTATACAAGAGGCAAGGGTACCAGGACAACCATCCAAACCTGGTGATGGTGGGCAAGCTGGCATTGGGTCATTAGAGGTTGAGGATGATGAGGAAATTGATCTTAGTGGTGACTTTGAACATGTGTGA 918 0.4205 MEERYESLKDLGSGNFGVAKLAKDKKTGELVAVKYIERGKKIDENVQREIINHRSLRHPNIIRFKEVLLTPTHLAIVLEFASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIIGVQYSIPDYVRVSSECRNLLSRIFVADPAKRITIPEIKQNPWFLKNLPKEIIEAERKGYEESKQDQPSQRVEEIMRIIQEARVPGQPSKPGDGGQAGIGSLEVEDDEEIDLSGDFEHV* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1661 305 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Apr10g1661 305 Gene3D Transferase(Phosphotransferase) domain 1 81 121 - -
Apr10g1661 305 SUPERFAMILY Protein kinase-like (PK-like) 3 239 IPR011009 -
Apr10g1661 305 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Apr10g1661 305 Gene3D Transferase(Phosphotransferase) domain 1 122 273 - -
Apr10g1661 305 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 119 - -
Apr10g1661 305 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 119 298 - -
Apr10g1661 305 PANTHER SERINE/THREONINE KINASE 119 298 - -
Apr10g1661 305 PANTHER SERINE/THREONINE KINASE 3 119 - -
Apr10g1661 305 Pfam Protein kinase domain 5 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1661 305 Pfam Protein kinase domain 124 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1661 305 MobiDBLite consensus disorder prediction 268 305 - -
Apr10g1661 305 ProSiteProfiles Protein kinase domain profile. 5 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1661 Apr-Chr10 29340450 29344540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1661 4 242 CBL-interacting serine-threonine protein kinases AT4G24400 39.051 1.69e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Apr10g1661 Pkinase 4.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1661 K14498 - gmx:100782714 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0741 7 14304276 14308154 Apr10g1661 10 29340450 29344540 PCT