Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1651 ATGGAACTCGGTTTCAAGCATCAACTTGGCCTTGTTTGTGTCATACTGTTCTTCTCTGCACTGTGTAACGGCCAGAAATATGTTACAAACTCCAGAGCAACCTATTATAGTACCCCTGATGGCTATGGGACTCCAAGTGGAGCTTGTGGCTTTGGCGACTATGGAAGGACGATCAACAGTGGAAGTGTAGCAGCCGTGTCTGGGCTATGGAGGAATGGAGCTGGCTGTGGCACATGCTATCAGGTAAGGTGCAAAATACCAGAATACTGTGATGACAATGGAGCATTCGTGGTGGCAACAGATTATGGTGCGGGAGACAGAACAGACTTCATCATGAGCCCACGCGCCTTCTCAAGTTTGGGACGCAACAAAGATGCAACTGCAAAGTTGATGAAATACGGTGTGGTGGATATTGAATACAAAAGGGTTCCTTGTAGATACCCTGGCAACATCAAGTTTCATGTCCAAGAAAGCAGCAGCAATCCTGGTTACTTTGCTGTCCTGATTCTCAACGTAAATGGAAAATACGACGTCGCTGCTGTTGAGTTATGGCAGAATGGACGATGGGAGGCCTTGCGCAGGGTCTATGGTGCAGTGTTTGACTTTGCTAACCCACCGAGTGGTGAAATCCGCTTGAGGTTCCAAGTGACTTATGGTGGATCAAACCAATGGGTGTACCCGAGGGTTGCTATCCCTAGTAATTGGAAGCCTGGGGCTACTTATGACGCCAAGGTTCAACTTAATTAG 747 0.4766 MELGFKHQLGLVCVILFFSALCNGQKYVTNSRATYYSTPDGYGTPSGACGFGDYGRTINSGSVAAVSGLWRNGAGCGTCYQVRCKIPEYCDDNGAFVVATDYGAGDRTDFIMSPRAFSSLGRNKDATAKLMKYGVVDIEYKRVPCRYPGNIKFHVQESSSNPGYFAVLILNVNGKYDVAAVELWQNGRWEALRRVYGAVFDFANPPSGEIRLRFQVTYGGSNQWVYPRVAIPSNWKPGATYDAKVQLN* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1651 248 Gene3D - 18 146 IPR036908 -
Apr10g1651 248 Pfam Expansin C-terminal domain 151 232 IPR007117 -
Apr10g1651 248 PANTHER EXPANSIN-B3 4 248 - -
Apr10g1651 248 Gene3D - 148 247 IPR036749 -
Apr10g1651 248 SUPERFAMILY PHL pollen allergen 150 242 IPR036749 -
Apr10g1651 248 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 243 IPR007117 -
Apr10g1651 248 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Apr10g1651 248 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Apr10g1651 248 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Apr10g1651 248 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Apr10g1651 248 PANTHER EXPANSIN-B1-LIKE PROTEIN 4 248 - -
Apr10g1651 248 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Apr10g1651 248 SUPERFAMILY Barwin-like endoglucanases 15 150 IPR036908 -
Apr10g1651 248 Pfam Lytic transglycolase 67 139 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1651 Apr-Chr10 29141104 29142873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1651 9 247 Expansin Gene Family AT4G17030 48.971 2.68e-79 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1651 - - gmx:100778424 366.696