Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g1650 | ATGGAACTCAGTTTTAAGCACCAACTTGGCCTTGTTTGTGTCATACTGTGTCTCCCTGCATTGTGTAATTGTATGGAATATGTTACGAACTCCAGAGCAACATACTATAATACCCCTGATGGCTATGGGAATCCAAGGGGAGCTTGTGGTTTTGGTGAATATGGAAAGACAATAAACAATGGCAGTGTCGCAGCCGTGTCTGGGTTATGGAGGAATGGAGCTGGCTGTGGTACATGCTATCGGGTATGGTGCAAAATGCCACAATATTGCAATGCAAATGGAGTTCAAGTGGTGGCAACGGACTATGGTGAGGGAGACCGAACAGACTTCATCATGAGCCCACGCGCCTTTTCGAGTTTGGGACGCAACGCATTTGCATCTTCTAAGCTGATGAAATACGGTGTAGTGGACGTTGAATTCAAAAGGGTCCCTTGCAGATACAATGGCCATAGCATCATGCTTCATGTCCAAGAAAGCAGCAAAAACCCTGGCTACTTTGCTGTTCTGATTCTCAACGTAAATGGAATGTGCGACGTCACTGCTGTTGAAATTTTGCAGAAAGAGTATCAACGATGGGAGCCTATGCGCAGGGTCTATGGGGCAGTGTTTGACTTTGCTAACCCACCAAGGGGTGAAATCCGCTTGAGGTTTCAAATGGGCAATTGCGGTGGGGAAGGCTTTACATATTGGGTGTACCCCAAGATTGCTATTCCTGCTAATTGGAAGCCTGGAGCTACTTATGACGCCAAGGTTCAGCTTAATTAG | 765 | 0.4641 | MELSFKHQLGLVCVILCLPALCNCMEYVTNSRATYYNTPDGYGNPRGACGFGEYGKTINNGSVAAVSGLWRNGAGCGTCYRVWCKMPQYCNANGVQVVATDYGEGDRTDFIMSPRAFSSLGRNAFASSKLMKYGVVDVEFKRVPCRYNGHSIMLHVQESSKNPGYFAVLILNVNGMCDVTAVEILQKEYQRWEPMRRVYGAVFDFANPPRGEIRLRFQMGNCGGEGFTYWVYPKIAIPANWKPGATYDAKVQLN* | 255 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g1650 | 254 | Pfam | Expansin C-terminal domain | 152 | 220 | IPR007117 | - | |
Apr10g1650 | 254 | SUPERFAMILY | Barwin-like endoglucanases | 14 | 149 | IPR036908 | - | |
Apr10g1650 | 254 | PRINTS | Expansin/Lol pI family signature | 27 | 42 | IPR007118 | GO:0005576 | |
Apr10g1650 | 254 | PRINTS | Expansin/Lol pI family signature | 66 | 84 | IPR007118 | GO:0005576 | |
Apr10g1650 | 254 | PRINTS | Expansin/Lol pI family signature | 133 | 149 | IPR007118 | GO:0005576 | |
Apr10g1650 | 254 | PRINTS | Expansin/Lol pI family signature | 235 | 249 | IPR007118 | GO:0005576 | |
Apr10g1650 | 254 | SUPERFAMILY | PHL pollen allergen | 152 | 248 | IPR036749 | - | |
Apr10g1650 | 254 | Gene3D | - | 146 | 250 | IPR036749 | - | |
Apr10g1650 | 254 | Gene3D | - | 22 | 145 | IPR036908 | - | |
Apr10g1650 | 254 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 164 | 249 | IPR007117 | - | |
Apr10g1650 | 254 | Pfam | Lytic transglycolase | 67 | 139 | IPR009009 | - | |
Apr10g1650 | 254 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 46 | 150 | IPR007112 | - | |
Apr10g1650 | 254 | PANTHER | EXPANSIN-B1-LIKE PROTEIN | 4 | 254 | - | - | |
Apr10g1650 | 254 | SMART | dpbb_1 | 62 | 140 | IPR007112 | - | |
Apr10g1650 | 254 | PANTHER | EXPANSIN-B3 | 4 | 254 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g1650 | Apr-Chr10 | 29134498 | 29135999 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g1650 | 1 | 254 | Expansin Gene Family | AT4G17030 | 49.412 | 6.93e-84 | 249 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g1650 | - | - | gmx:100779487 | 363.614 |