Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1637 ATGTACGGGCAAAGTACCTACGAATCAGATTTGGCCCTTTTGGATTCTATTCGCCGCCACTTGCTGGGCGAGTCCGAATCCATATTCGGAGCCCCGACGAGTGTTTCCGGTAACGCCCGTGTCTACTCTCGGAGCTCCAGTTTCAGCAGCTTGTACTCGTGTTTGAGTGATAATTGGGGCGAACTTCCGCTAAAAGAGGACGATTCCGAAGACATGGTGCTCTACGGCGTGCTCCGTGACGCCGTTAACGTTGGCTGGGTCCCATCTCTCGATGCCCGGTCACCCGAAAGCATTTCGTCGGATTTTCCTGCCGAGATTGCGGTTAAATCCGAGCCTGATGTGATGCCGCCGGCGAACAGTCCCCCAGCGGTTGTGCCCGTGATTTTGCCGGAGAAGAAGGTTTCTCCAGCGAAGGGGAAGCACTACCGCGGCGTGCGGCAACGGCCGTGGGGGAAGTTCGCGGCGGAAATTCGGGACCCGGCGAAGAACGGTGCTAGGGTTTGGCTTGGAACGTTTGAGACCGCTGAGGATGCTGCGTTGGCTTACGATCGTGCCGCGTACCGGATGCGAGGGTCGAGGGCGTTGCTGAATTTTCCGCTTCGGGTTAACTCCGGCGAACCCGACCCGGTTAGGGTTACGTCGAAACGGTCTTCGCCGGAGCGTTCGTCTTCGTCGGAGAGTGGGTCGTCGGCGAAGAGGAAGAAAGTGGGGGTGACGGGTCAGGGGCAAGTGGGAAGTCAAGTGGCGGAGTGTACACGTGGCGAACAGTTATTGGTTAGTTGA 783 0.5798 MYGQSTYESDLALLDSIRRHLLGESESIFGAPTSVSGNARVYSRSSSFSSLYSCLSDNWGELPLKEDDSEDMVLYGVLRDAVNVGWVPSLDARSPESISSDFPAEIAVKSEPDVMPPANSPPAVVPVILPEKKVSPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPERSSSSESGSSAKRKKVGVTGQGQVGSQVAECTRGEQLLVS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1637 260 Gene3D AP2/ERF domain 140 202 IPR036955 GO:0003700|GO:0006355
Apr10g1637 260 CDD AP2 140 199 IPR001471 GO:0003700|GO:0006355
Apr10g1637 260 PANTHER DNA-BINDING DOMAIN 26 248 IPR044808 GO:0003700|GO:0009873
Apr10g1637 260 MobiDBLite consensus disorder prediction 203 247 - -
Apr10g1637 260 MobiDBLite consensus disorder prediction 216 247 - -
Apr10g1637 260 PRINTS Ethylene responsive element binding protein signature 142 153 IPR001471 GO:0003700|GO:0006355
Apr10g1637 260 PRINTS Ethylene responsive element binding protein signature 165 181 IPR001471 GO:0003700|GO:0006355
Apr10g1637 260 Pfam AP2 domain 141 191 IPR001471 GO:0003700|GO:0006355
Apr10g1637 260 PANTHER BNAANNG21280D PROTEIN 26 248 - -
Apr10g1637 260 ProSiteProfiles AP2/ERF domain profile. 141 199 IPR001471 GO:0003700|GO:0006355
Apr10g1637 260 SUPERFAMILY DNA-binding domain 141 201 IPR016177 GO:0003677
Apr10g1637 260 SMART rav1_2 141 205 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1637 Apr-Chr10 28990684 29004150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1637 8 259 AP2-EREBP Transcription Factor Family AT4G17500 56.115 3.58e-87 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr10g1637 AP2 1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1637 K09286 - gmx:100803653 340.117