Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1636 ATGGCAAACCCAGCGGAACTTTCAGCTCTAAATCGCATTAAATTACATCTTTTAGGTGAACTCTCTCCACTCCCCATTTCCCAAAACGAACAACAACCCTGGTTCCAATTTCACCAAACAAACCCTAGCCCCTCTAAATCCCAATCTTCCTCTTCTGACTCTTCAATCTCTTTGAATCATTACTTCACCGACCTCCTCGAAGCTGAAACTCAAGTTCCCCTCTTTGAATTCGACTCCAAACCCCAAGTGATCGACCTCCAAACCCCGAAACCTCTAGCATCAAATTCGAGTTCTTCACCTCAACAATCCCAAGAGAAGAAGCCTCAACTCACTCGGAAACCGTCGCTGCAAATCTCTCTCCCGAACAAAACCGAGTGGATCCAATTCGGAAACCCGGATCCGAACCCGGAGGTGTTCGTGAAACAAAACCAACCCGAGAAGAAGCACTACCGAGGGGTGCGACAGAGGCCGTGGGGAAAATTCGCCGCCGAGATCCGCGACCCCAAAAAGCGCGGGTCGAGGGTGTGGCTCGGAACCTTCGACACCGCCATCGAAGCCGCCAAAGCCTACGACCGAGCCGCGTTCAAGCTTCGCGGCTCCAAAGCCATCCTTAACTTCCCTCTTGAAGTCGGCGCGGCGGTTGCCGACAACGACGGCGAGAGAAAGCGCCGCCGTGAAGAGGAGGAAGTGAAAGCGCTGGTGAAAAAAGAGAGAACCGTGGAACCGGAATTGAATTATATTAGCGAGATGCCTTTAACGCCGTCTATTTGGACGGGGTTTTGGGACAATGATGTCAAGGGGGTTTTCAACGTGCCGCCGTTGTCGCCGTTATCTCCCCTTCCTTCTTTAGGATTTTCGCAGCTTATGGTTGTGTGA 876 0.5171 MANPAELSALNRIKLHLLGELSPLPISQNEQQPWFQFHQTNPSPSKSQSSSSDSSISLNHYFTDLLEAETQVPLFEFDSKPQVIDLQTPKPLASNSSSSPQQSQEKKPQLTRKPSLQISLPNKTEWIQFGNPDPNPEVFVKQNQPEKKHYRGVRQRPWGKFAAEIRDPKKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEVGAAVADNDGERKRRREEEEVKALVKKERTVEPELNYISEMPLTPSIWTGFWDNDVKGVFNVPPLSPLSPLPSLGFSQLMVV* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1636 291 MobiDBLite consensus disorder prediction 87 116 - -
Apr10g1636 291 CDD AP2 148 207 IPR001471 GO:0003700|GO:0006355
Apr10g1636 291 MobiDBLite consensus disorder prediction 88 116 - -
Apr10g1636 291 ProSiteProfiles AP2/ERF domain profile. 149 207 IPR001471 GO:0003700|GO:0006355
Apr10g1636 291 SMART rav1_2 149 213 IPR001471 GO:0003700|GO:0006355
Apr10g1636 291 SUPERFAMILY DNA-binding domain 149 209 IPR016177 GO:0003677
Apr10g1636 291 MobiDBLite consensus disorder prediction 32 55 - -
Apr10g1636 291 PRINTS Ethylene responsive element binding protein signature 150 161 IPR001471 GO:0003700|GO:0006355
Apr10g1636 291 PRINTS Ethylene responsive element binding protein signature 189 209 IPR001471 GO:0003700|GO:0006355
Apr10g1636 291 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 3 276 - -
Apr10g1636 291 Gene3D AP2/ERF domain 148 209 IPR036955 GO:0003700|GO:0006355
Apr10g1636 291 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 276 - -
Apr10g1636 291 Pfam AP2 domain 149 199 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1636 Apr-Chr10 28974249 28975471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1636 1 291 AP2-EREBP Transcription Factor Family AT5G47230 47.619 1.60e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr10g1636 AP2 8.5e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1636 K09286 - gmx:100800453 337.421