Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1633 ATGCATATTGAGGAATTGAAGGGAGGTGAGGTGGGAGAAGTTAGAGGGGAAGGAAGATCGAGCTTTGTAGGTTCCGAAGCGAAGAGGGTATTGGTTGGAGCTGGTGCTCGTGCGCTCTTCTATCCAACCCTTTTTTACAATGTCGTTAGAAATAAGATTCAGGTTGAGTTTCGATGGTGGGATAGGGTTGATGAGTTCATATTGTTAGGTGCCGTTCCATTTCCCATTGATGTTCCCCGCTTGAAGGAGCTTGGTGTTCGTGGGGTCATCACATTGAACGAGTCATATGAGACTTTGGTTCCAACCACATTATATCATGCTCATGGAATTGATCATCTGGTAATTCCTACTAGAGATTACTGTTTCGCTCCATCATTGCATGACATACACCGTGCTGTGGACTTCATACATGAAAATGCATTGTCTGGACGCACTACATATGTCCACTGCAAAGCTGGACGTGGTCGCAGCACGACTATTGTTATTTGTTATCTGGTACACCACAAACTGATGACACCTGATGCTGCATATGATTATGTGAAGTCAATTCGGCCAAGGGTGCTTCTAGCTTCCTCTCAGTGGCAAGCTGTCCAGGAATACTACTATCACCTTATGATGAGGAGGGTTGTTGGATGTGCTCCTACCTCTGGTCTATTAGTAAGGACTTCTAAGGTAGCATCAGCTTCACGAGATCTTGTAACATTTGATGACAGTTCTGTAGTCATAGTAACAGAGTCAGATCTTGAAGGGTACGACTCAAGTAATCAATCAGGAACCATGGCTGGTGAAATGTGGACAGATTTAAGCGTTGTTTACCGTGTGCGAGTTGCTGGACAGGCAGCATTGGCAAGAATATCTTGCCTTTGGCTGCGATATGGTACTACTAACCAGAAGATTACTACGGAGAAACTGAGCAGGGAAAGCAGTTGCTCCATCAGTGCTAATCACTTGGGAGGAATTAGTGTTGATATCCATGTATACTAA 984 0.4451 MHIEELKGGEVGEVRGEGRSSFVGSEAKRVLVGAGARALFYPTLFYNVVRNKIQVEFRWWDRVDEFILLGAVPFPIDVPRLKELGVRGVITLNESYETLVPTTLYHAHGIDHLVIPTRDYCFAPSLHDIHRAVDFIHENALSGRTTYVHCKAGRGRSTTIVICYLVHHKLMTPDAAYDYVKSIRPRVLLASSQWQAVQEYYYHLMMRRVVGCAPTSGLLVRTSKVASASRDLVTFDDSSVVIVTESDLEGYDSSNQSGTMAGEMWTDLSVVYRVRVAGQAALARISCLWLRYGTTNQKITTEKLSRESSCSISANHLGGISVDIHVY* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1633 327 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Apr10g1633 327 Gene3D Protein tyrosine phosphatase superfamily 59 210 IPR029021 -
Apr10g1633 327 Pfam Dual specificity phosphatase, catalytic domain 81 201 IPR000340 GO:0008138|GO:0016311
Apr10g1633 327 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Apr10g1633 327 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 50 205 IPR029021 -
Apr10g1633 327 PANTHER - 1 327 - -
Apr10g1633 327 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 327 - -
Apr10g1633 327 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Apr10g1633 327 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Apr10g1633 327 SMART ptp_7 101 206 IPR003595 -
Apr10g1633 327 CDD PTPMT1 59 201 IPR044596 GO:0004721
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1633 Apr-Chr10 28936166 28940422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1633 19 327 Protein tyrosine phosphatase (PTP) family AT2G35680 62.069 1.24e-129 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1633 - - gmx:100790413 564.688