Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1625 ATGGACATGGAAGAATCTGTCCCCATAGATAGTGAAGTTCAACCAACCACCTCATCATCTTTCACCATTACTACTTCCTCCTCTTCCACAGAAGAAGCAACTAACATAGAGGGAAAAAAGAAGGTGAAGAGAAGCAATGAAGGGAAGCACCCAACGTATAGAGGAGTGCGTATGCGTCAATGGGGTAAATGGGTATCCGAAATTAGAGAGCCAAGGAAGAAATCAAGAATTTGGCTTGGTACTTTTCCCACACCGGATATGGCGGCTCGAGCCCACGATGTGGCGGCTCTCACAATTAAAGGCAGCTCGGCTTACCTCAATTTCCCCGAATTAGCCGCTGAGCTGCCACGCCCCGCCAGCACTTCCCCTAAGGACATCCAAGCTGCTGCCGCCAAAGCCGCTGCCTTGGATTTCAACCACCGGAGCCATGAAGCTGAATTGGAAGCCGAGTCTGAACTGAGCCGAGCCGTTTCCTCTTCAAGCCTCACCCAAGCTTCGTCATCGTCCGATTCATCGTTGAATGGTGAGGATGACACATTCTTGAACCTTCCTGATCTTTCACTCGACTTGAACCATGGTGCTGATGAGTTTCATTATTCCTCAGCTTGGCTTGTAGCTGGAGCCGAACATATAGATTCGGGTTTCCGGCTTGAGGAGCCGTTTCTATGGGAATCATATTAA 681 0.4934 MDMEESVPIDSEVQPTTSSSFTITTSSSSTEEATNIEGKKKVKRSNEGKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELAAELPRPASTSPKDIQAAAAKAAALDFNHRSHEAELEAESELSRAVSSSSLTQASSSSDSSLNGEDDTFLNLPDLSLDLNHGADEFHYSSAWLVAGAEHIDSGFRLEEPFLWESY* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1625 226 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 224 - -
Apr10g1625 226 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF039-LIKE 14 224 - -
Apr10g1625 226 MobiDBLite consensus disorder prediction 1 51 - -
Apr10g1625 226 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
Apr10g1625 226 MobiDBLite consensus disorder prediction 34 51 - -
Apr10g1625 226 Pfam AP2 domain 51 101 IPR001471 GO:0003700|GO:0006355
Apr10g1625 226 SUPERFAMILY DNA-binding domain 52 110 IPR016177 GO:0003677
Apr10g1625 226 MobiDBLite consensus disorder prediction 10 33 - -
Apr10g1625 226 Gene3D AP2/ERF domain 52 110 IPR036955 GO:0003700|GO:0006355
Apr10g1625 226 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Apr10g1625 226 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Apr10g1625 226 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
Apr10g1625 226 CDD AP2 53 111 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1625 Apr-Chr10 28830712 28832051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1625 41 222 AP2-EREBP Transcription Factor Family AT2G44940 53.333 1.15e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr10g1625 AP2 8.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1625 - - gmx:100101914 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0706 7 13905374 13905905 Apr10g1625 10 28830712 28832051 PCT