Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1605 ATGATGGAAGATGTAGCAATAATTGGAGGGTTGATAGGGGTTCAACTTGTTTTCGCGGGGAATGCTGTGCTTTTGAGTTATCTTATGTCTTTGGGCATCAATTATCTTACCCTTGTCATTTTTACTTCCTTTGCCACATTCCTTGTTCTTCTCCCCGTTGCCTTTTATTATGAAAGGTGTAAATGGCCCAAGAAAGTTAGCTTCAAGTTGCTTATGCAGCTTCTGTTGCTTTCATTTGGAGGGGTAACAATGTTCCAGTCTTTATTCCTTAAAGGAATCAATCTAACCTCGCCAGCAATGGGAACTGCCATGCCAAACCTTGCCCCAGGTCTTATATTCATCATCGCATGGATTTTTCGGTTGGAAAAAGTGAAGTTAAGGTGTACATATAGTAGAGTAAAAATCATTGGCACATTCCTTTGCGTCTTAGGGGCTCTCACAATGAGCATAATGCAAAGCATTTCTAAACCTACACCTTTGAACGAGGGAACAATTCAATTATCATCTGCACCGCCAAATGTAACCTTTGACAGGCAAAAGTTAATCGGCTGCCTCTATCTCTTGGTCGCAGTCCTCATATTGTCATGCAACATTGTCCTACAGGCTTTTACCCTAGGAGATTTTCCTGCCCCCGTGTCCCTGTGTGCATTAACTTCGTTTTTTGGGACCTTCATGACTGCAGCAGTGAAATTACTTGAAGATCACGAATTCAAAACTGGTTGGCCACTTGTGGGTGTTGGAGATATGATTGGCTATTCTCTTCTGGCAGGTTCAGTGACTGGAATATGCTTAAGCTTCAATGGTTGGGCACTGGAGAAGAGAGGACCAGTGTTGGTCTCCATGTTCAGCCCCATAGGCACAGTCTGCTCTGTCTTTTTCTCGGTTGTTACACTAGGAGACACCATTAATATTGGAAGCTCTGCGGGTATGCTCCTCATGTTCACTGGGCTCTACTTTGTGCTTTGGGCCAAAGGGAAAGAAGGCTATGCAAACGGAGGTGACTTAGACGCAGAGAAGCCTCTCTTAAGTTAA 1032 0.437 MMEDVAIIGGLIGVQLVFAGNAVLLSYLMSLGINYLTLVIFTSFATFLVLLPVAFYYERCKWPKKVSFKLLMQLLLLSFGGVTMFQSLFLKGINLTSPAMGTAMPNLAPGLIFIIAWIFRLEKVKLRCTYSRVKIIGTFLCVLGALTMSIMQSISKPTPLNEGTIQLSSAPPNVTFDRQKLIGCLYLLVAVLILSCNIVLQAFTLGDFPAPVSLCALTSFFGTFMTAAVKLLEDHEFKTGWPLVGVGDMIGYSLLAGSVTGICLSFNGWALEKRGPVLVSMFSPIGTVCSVFFSVVTLGDTINIGSSAGMLLMFTGLYFVLWAKGKEGYANGGDLDAEKPLLS* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1605 343 Pfam EamA-like transporter family 12 149 IPR000620 GO:0016020|GO:0016021
Apr10g1605 343 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020|GO:0016021
Apr10g1605 343 PANTHER WAT1-RELATED PROTEIN 7 334 IPR030184 GO:0016021|GO:0022857
Apr10g1605 343 PANTHER WAT1-RELATED PROTEIN 7 334 - -
Apr10g1605 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1605 Apr-Chr10 28606664 28610598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1605 1 331 Nodulin-like Gene Family AT5G47470 56.627 1.69e-134 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1605 - - gmx:100809182 576.63