Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1602 ATGGGTAAGGTTCACGGATCTCTTGCCCGTGCGGGGAAAGTGAGAGGGCAAACCCCCAAAGTGGCAAAGCAAGACAAGAAGAAGAAGCCACGTGGCCGCGCTCACAAGCGAATGCAATACAATCGCCGATTCGTCACAGCCGTGGTGGGATTCGGAAAGAAGCGTGGACCAAACTCGTCTGAGAAGTGA 189 0.545 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK* 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1602 62 MobiDBLite consensus disorder prediction 1 40 - -
Apr10g1602 62 MobiDBLite consensus disorder prediction 22 40 - -
Apr10g1602 62 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 1 62 - -
Apr10g1602 62 Pfam Ribosomal protein S30 3 59 IPR006846 GO:0003735|GO:0005840|GO:0006412
Apr10g1602 62 PANTHER 40S RIBOSOMAL PROTEIN S30 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1602 Apr-Chr10 28565578 28566334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1602 1 62 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 96.774 1.14e-30 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1602 K02983 - egt:105965546 118.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0689 7 13738201 13738859 Apr10g1602 10 28565578 28566334 PCT