Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1597 ATGATTTCTCTGCTCCCCAAAACCCTAACCCTCATTCGTTTCCTTCACAGACCAACGCGAACACACCCTACTAAACTAACCGCCATTCGAACCATGAGCTCCACCTCCACGCAGCGCATCTTCCAGCTCAAGCTCGACCCACTAACAGGTAAATCCGAATGGGTCATCATCGAAGACAATGACGACAACGACCAAACCTTTGCACATAGTTTCCCTCAACCCCTTCTCGCCACGACGTCGTATTTGGACATGCTCAACGACTCCGCTAGAAACACAGCATTTCGTCAAGCCATTGAAAAAACCATCACCAAACCATGCCACGTTCTTGATATCGGTGCTGGAACTGGATTGCTTTCTATGATGGCTGCGAGAGCCATGGGTGACGAAGGGAAGGTCACGGCGTGTGAGTCTTACCTTCCGATGGTGAAGTTGATGAAGAAGGTGTTGCGTCTTAACGCCATGGAAGGAAGGGTCAAAGTCATCAACAAGCGTTCTGATGAACTCGAAGTTGGTATTGATATCTCTTCACGTGCCCATGTTCTGGTAAGCGAGATATTAGATTCAGAACTACTGGGTGAGGGGCTTATACCGACCCTACAACATGCACATGACAATTTGTTGGTGGAAAACCCTCTGACTGTCCCATATCGAGCAATCACATATGGGCAGCTCGTTGAAAGCACATATCTGTGGCAGCTGCATGATTTGCATGACAATGAGGCTAATGCATCTGATGGAATTCGTCTTACCCCTGTGGGACTTGATAGTGTTTTAAGTGTCAAACGTCAGCAGTATGCTATGCATTGCGATCCTATTAGAGAAGAATTAAAACTGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTATGGAGAAACTGAGCTGCTCGTAAGGGCAACTAATAATGGTAGAGTTCATGCCGTGGTTTCTTGGTGGGTACTTCAACTTGATCGTGAAGGGACCATCTATTATTCCACTGCTCCCAGGTGGATAAGCTCACCAACAATTACAAGTTGTGTTGATTGGTGTGACCACTGGAAACAGTGTGTTTGGTTTGTTCCAGGCAGTGGTATTTCCATAATCAAAGGGGATGAAATTCATTTGCATGCTACTCATACTGAAACTAGTATCTCATATAATTTAGATACTCGAGGGCCGACAACTGAGATTTTGCAGCATAGGTTGACAGCTGAAGTTTTGCAGCTTGAGCTGACACCAGAAAGGGCTTCAATCTATGGAGACAAAGAATGGAGGCTTTCAATGTCAAAGGCAGTTCAAAGTGTGTTGCAGGGAAGAGGTCACACACTATGTTTGGTTGCAGATGATAGTGTGTTTTTACCTCTTCTTGTGGCACGGCTTTCAGAGGCACCACATGTAATGTCATTACTTCCAGGGCTGAAAGAAAGTGGCCTCCAATATTTGCACACTGCCACCAATGCAAATGGTTTATCACCTAATTGCATAGAAGTTTTAGAAAAAAGGGTGAAACAGTTATCCATGCATGATACACATCAGAAAAAGGTTGATCTGTTAATTGCAGAACCTTTCTATGTAGGACATGAAGGTGTGCTTCCGTGGCAGAACCTGCGGTTTTGGAAGGATCGCACAACACTTGATTGTATCCTCTCTGAAGATGCTCTGATAATTCCTAGTAAAGGAATATTGAGAGCTTGTGCTGTCTCTCTTCCTGATCTTTGGAAAAGTCGTTGTTGCTTGAGTGAGATTGAAGGTTTTGACCATTCGGTGGTAAATGCTACATTGGGGGCTTGCGGTCATCTATCTGAATTAGAAGAGGGTCCTTGTCTCCCTTTTTTTGTTTGGCAGTGTGGAGAATTTGATGTGCTTAGTGAGACATTTGATGTGATGGAGTTTGATTTCTCAAAACAAATATGCCAATGTCAAGGAAAATCCCAGGTTAAATTCACCAAGACTGGGTTATGTCACGGGTTTGTGCTATGGGTTGACTGGGTGATGGATTTGCAAAATTCTGTTGTGATATCGACTGGTCCAGATAAGAGATATTGGAAGCAGGGAGTAAAGCTTCTTGGAACTCCTAGAACAGTAGGACCTCAAAGATCAAGAAATGTCCAAGAATGTTGTTCTGCATTTCTCGAAGAAATGGGGTTACATATGGTGGCTCTGGCTAAACTCCACTTTCAACTTACGAGCCACGGTTTAAGACCCGCGGCGGTTGGAATCGCTTCTCCAATCGTGCTTAAGTTGTTGTTTGGTTTCAGGGTTTTCAGAGATGATGCTCTTTACCAATCAAGATTGTTCCTTTTCCAATTGGGTCACATAGCTTTCAATAGGGAAACCCAAGTTTCCTATTTAGAAAGAATGCAAAGAGCTCTTCGATTAATCTGGAGAATATTCAACCCCGTCACTCAATCATCCTCGGAGGACTCGCAAATTGGACACCACCACACCTTCCATGAACTTTCAATGCTTGCACTTTAA 2478 0.4391 MISLLPKTLTLIRFLHRPTRTHPTKLTAIRTMSSTSTQRIFQLKLDPLTGKSEWVIIEDNDDNDQTFAHSFPQPLLATTSYLDMLNDSARNTAFRQAIEKTITKPCHVLDIGAGTGLLSMMAARAMGDEGKVTACESYLPMVKLMKKVLRLNAMEGRVKVINKRSDELEVGIDISSRAHVLVSEILDSELLGEGLIPTLQHAHDNLLVENPLTVPYRAITYGQLVESTYLWQLHDLHDNEANASDGIRLTPVGLDSVLSVKRQQYAMHCDPIREELKLLSEPFKIFEFDFWKRPESYGETELLVRATNNGRVHAVVSWWVLQLDREGTIYYSTAPRWISSPTITSCVDWCDHWKQCVWFVPGSGISIIKGDEIHLHATHTETSISYNLDTRGPTTEILQHRLTAEVLQLELTPERASIYGDKEWRLSMSKAVQSVLQGRGHTLCLVADDSVFLPLLVARLSEAPHVMSLLPGLKESGLQYLHTATNANGLSPNCIEVLEKRVKQLSMHDTHQKKVDLLIAEPFYVGHEGVLPWQNLRFWKDRTTLDCILSEDALIIPSKGILRACAVSLPDLWKSRCCLSEIEGFDHSVVNATLGACGHLSELEEGPCLPFFVWQCGEFDVLSETFDVMEFDFSKQICQCQGKSQVKFTKTGLCHGFVLWVDWVMDLQNSVVISTGPDKRYWKQGVKLLGTPRTVGPQRSRNVQECCSAFLEEMGLHMVALAKLHFQLTSHGLRPAAVGIASPIVLKLLFGFRVFRDDALYQSRLFLFQLGHIAFNRETQVSYLERMQRALRLIWRIFNPVTQSSSEDSQIGHHHTFHELSMLAL* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1597 825 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 81 383 IPR029063 -
Apr10g1597 825 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 60 389 IPR025799 GO:0016274|GO:0018216
Apr10g1597 825 Gene3D - 561 719 - -
Apr10g1597 825 Gene3D Vaccinia Virus protein VP39 409 557 IPR029063 -
Apr10g1597 825 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 394 713 IPR025799 GO:0016274|GO:0018216
Apr10g1597 825 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 484 698 IPR029063 -
Apr10g1597 825 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 7 40 671 - -
Apr10g1597 825 Gene3D - 217 402 - -
Apr10g1597 825 Gene3D Vaccinia Virus protein VP39 74 216 IPR029063 -
Apr10g1597 825 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 40 671 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1597 Apr-Chr10 28501325 28508942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1597 83 232 C2H2 Transcription Factor Family AT3G12270 30.061 7.78e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1597 K11438 - gmx:100785846 1249.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1597 10 28501325 28508942 Apr10g1597 10 28501325 28508942 ECH