Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1578 ATGGCGAGTGGGTGGGTGAAGTCGTGGCAGTGCAAGTCAAGAGCATTTGAAGACGTGTACCACCCGAACTCCAAAATCCTGATACCAAGTGCAAGTTGCAGAAAGAGCGTTCAAAACATCAAAGACATGGTCGACGTACCTAAGCCCAAGCCCAAGCCCAGAATGCCCAAGCCTAAGCAACCTTTGGAAAAACATCCAAGTTCTAAATACCCAACAACCAAACCCGAATTCGAAGCCTCTCTCAACCGAACAACCACCATGTCTCGCTCACGAAGCACCACTACCACGACCATGACAACCTCGTCCCGTGTCATCATTGAGCTCCCCGAGGGGCACCCTTCGCGTAACGTTGTTGAGATTATCTTCCACACCAGCTGGGGCCCTAAGTCATTTCCGGGTCGGGTCGAGATGATATTCAAGGTCCAAAATGGGTCGCGGACCATATCGCGCTTCGAGGAGTTTCGCGAGGCTGTGAAGGCACGCGCCGCCGCGGGTCTCTCTGAGGGGAACGACTGGGAAGAGAATGCGCGGTACATCGCCGATGGGAACGAGGTGATGCGGTTTTATTGCTTGGGTCCCGCCGAGGACGGTGGTCCCTACGACGGCGGCTGTGCATGGTCGTTTCCGGAGAGAAAAGGGTCGGCGATCTGCACGTTTTCCGGCAGCGGCGGCGCTCATGAGACTGCCGGCGGAGGCAGGGGCAGAAGGGCTATGTTGGTTTGCCGGGTCGTGGCGGGTCGGGTCTCGAAGCAACTCGGATTTCTGGACTCGTTGTTGGATAAGCGAGTGGGTTTCGACTCGGTGAGTGGGGACAGCGGCGAGTTGCTAGTGTTTGACTCGCGTGCGGTATTGCCCTGCTTTCTTATTATTTACAAGTTGTAA 882 0.5567 MASGWVKSWQCKSRAFEDVYHPNSKILIPSASCRKSVQNIKDMVDVPKPKPKPRMPKPKQPLEKHPSSKYPTTKPEFEASLNRTTTMSRSRSTTTTTMTTSSRVIIELPEGHPSRNVVEIIFHTSWGPKSFPGRVEMIFKVQNGSRTISRFEEFREAVKARAAAGLSEGNDWEENARYIADGNEVMRFYCLGPAEDGGPYDGGCAWSFPERKGSAICTFSGSGGAHETAGGGRGRRAMLVCRVVAGRVSKQLGFLDSLLDKRVGFDSVSGDSGELLVFDSRAVLPCFLIIYKL* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1578 293 PANTHER POLY(ADP-RIBOSE) POLYMERASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 2 292 - -
Apr10g1578 293 Gene3D - 103 292 - -
Apr10g1578 293 MobiDBLite consensus disorder prediction 43 100 - -
Apr10g1578 293 MobiDBLite consensus disorder prediction 45 64 - -
Apr10g1578 293 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 292 - -
Apr10g1578 293 SUPERFAMILY ADP-ribosylation 105 292 - -
Apr10g1578 293 MobiDBLite consensus disorder prediction 73 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1578 Apr-Chr10 28304611 28305622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1578 107 293 C2H2 Transcription Factor Family AT2G29660 37.611 6.62e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1578 - - gmx:100811674 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1578 10 28304611 28305622 Apr10g1578 10 28304611 28305622 ECH