Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1571 ATGATCAGAAAATCACACATGTACCCTGCCAGTGGCAACCGAAACGTAATCTTCAAATTGGTGCGGTGTTTTGGACAAGGAAGCAATGGATTGTGTTTGCAAACATGGGAGCCCAAGTATGTAGAGTTGGGCCATAGCCCAATAGAGCTTCCAAAGGGACATTTGGCGGTGTATGTGGGGGAATCGGAGGATGAGAAGCAGCGTGTGTTGGTACCCATTACACACCTCAATCATCCACTCATTGGAAAGCTATTAGAGGAGGCAGAGAAAATTTACGGGTTCGACCATCCTGGTGTAATAACCATACCATGCGGAATCTCCGAGTTCCAGAGAATTCAGAAGATTATCACCACCACCACCCATGGCTTCCACAAGCGCCTTTGCATTTGTTGTTTCATCCACTGA 405 0.4691 MIRKSHMYPASGNRNVIFKLVRCFGQGSNGLCLQTWEPKYVELGHSPIELPKGHLAVYVGESEDEKQRVLVPITHLNHPLIGKLLEEAEKIYGFDHPGVITIPCGISEFQRIQKIITTTTHGFHKRLCICCFIH* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1571 134 Pfam Auxin responsive protein 46 114 IPR003676 GO:0009733
Apr10g1571 134 PANTHER - 11 133 - -
Apr10g1571 134 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 11 133 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1571 Apr-Chr10 28166241 28166645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1571 47 116 Calmodulin-binding Proteins AT3G43120 48.571 9.16e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1571 K14488 - gmx:102668727 180.644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1571 10 28166241 28166645 Apr10g1571 10 28166241 28166645 ECH