Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1568 ATGGCATCAACACTCCTCAGCCTCTCTTTGCTGGTCCTTTTAATTGCTGCAGGCACCGTCGAGTCCTCAGTTACCAAACGATCCAAATCCAACCCAACAGACTTCATCAAGTCCTCATGCAAGGCCACTCGGTACCCCGTCGCGTGCGTTCAAAGCCTCTCGGGATACGCAAACGCGATTCGCCAAAGCGACCAGCAACTAACAATCACGGCCCTGTCAGTGAGCGTATCAAGGGCCCAGTCATGCGCATCATTCGTGAAGAAGATGGGCTTAGTGAAGGGGATGAAGCCCATGGAGTACAGTACTGTGAGAGATTGCATAGATAATATGAATGACAGTGTTGACCGTTTGAACCAATCGGTTAAGGAGTTTGGGCTTGTGGGTAAGGGTAAGGGCAAGGGGAAGGATTTGGCGTGGCACATGAGCAACGTACAGACTTGGGTCAGTGCTGCTATCACTGATCAGGCCACGTGTCTTGATGGGTTTGATGGGCCCCACGTTGATAGAAAGTTGAACGCTGCGATTAGGCCCAAGGTTGTGGACGTTTCTCAAGTCACTAGTAATGCCCTTGCTTTCGTGAATCGATTTGCATCGAGGCACCGTGCTGCTGCTGCACTCACTAATTAA 627 0.5088 MASTLLSLSLLVLLIAAGTVESSVTKRSKSNPTDFIKSSCKATRYPVACVQSLSGYANAIRQSDQQLTITALSVSVSRAQSCASFVKKMGLVKGMKPMEYSTVRDCIDNMNDSVDRLNQSVKEFGLVGKGKGKGKDLAWHMSNVQTWVSAAITDQATCLDGFDGPHVDRKLNAAIRPKVVDVSQVTSNALAFVNRFASRHRAAAALTN* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1568 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 196 IPR035513 -
Apr10g1568 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 196 IPR035513 -
Apr10g1568 208 PANTHER PECTINESTERASE INHIBITOR 9 11 200 - -
Apr10g1568 208 CDD PMEI-like_3 38 198 - -
Apr10g1568 208 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 194 IPR006501 GO:0004857
Apr10g1568 208 Pfam Plant invertase/pectin methylesterase inhibitor 34 191 IPR006501 GO:0004857
Apr10g1568 208 SMART PMEI_2 31 192 IPR006501 GO:0004857
Apr10g1568 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1568 Apr-Chr10 28136623 28137249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1568 36 193 Carbohydrate Esterase AT3G14310 30.000 9.24e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1568 - - gmx:100789460 265.774