Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1555 ATGGAAACCAGTGGCGGTGTTAGCGGCGGCGTTACAGTGGTCGGATCGGATGCTCCGTCGGACTACCATGTAGCTCCGAGGACCGACAATCCGGCTCCGACCGGTGGATCCACCACGCAGATTCCGGCGACGGCGGGGAGTGCTCCGCCGCCGTCACACCCGCCACACGCGGCGGCGATGGAGGCGTCTCCGGCGACTATGCCGGCGAAGAAGAAGAGGGGTCGGCCGAGAAAGTATGCACCAGACGGGTCGGTGACCATGGCGCTGTCTGCAAAGCCAATATCTTCTTCGGCCCCGTTGCCGCCGGTGATCGATTTCTCGGCGGAGAAGCGCGGAAAAGTAAAGCCAAATAGCTCGCTGAGCAAAGCCAAGTTTGAGTTGGAGAATTTAGGAGAATGGGTTGCATGCTCAGTTGGTGCTAATTTTACACCTCATATCATCACTGTTAATTCTGGGGAGGATGTTACTATGAAGGTAATATCATTTTCTCAACAAGGGCCTCGAGCTATATGCATTCTTTCAGCTAATGGTGTCATATCAAGTGTCACACTTCGTCAGCCTGATTCTTCTGGGGGCACATTGACATATGAGGGTCGATTTGAAATTCTGTCTTTATCTGGCTCATTCATGCCGAATGAAAGCGGAGGAACACGTAGCAGATCAGGTGGCATGAGTGTTTCTTTAGCAAGTCCTGATGGACGTGTTGTAGGTGGAGGAGTAGCTGGTCTGTTAGTGGCTGCAAGTCCTGTGCAGGTAGTGGTAGGAAGTTTTCTGGCAGGAAACCAACACGAGCAGAAGCCAAGAAAACAGAAACATGAGGTAATATCCACTGCAACACCAACTGCAGTTGTTCCCATCACTACTCTTGATCCAATACCTATTCTATCGTCAGCTTCATCCATCCGCGGAGAAAATTGGTCTGCTATGCCGGCGGATGCCAAGAATAAGCCGGCCGACATTAACGTGTCCCTTCCTGGAGGGTAA 984 0.5224 METSGGVSGGVTVVGSDAPSDYHVAPRTDNPAPTGGSTTQIPATAGSAPPPSHPPHAAAMEASPATMPAKKKRGRPRKYAPDGSVTMALSAKPISSSAPLPPVIDFSAEKRGKVKPNSSLSKAKFELENLGEWVACSVGANFTPHIITVNSGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPRKQKHEVISTATPTAVVPITTLDPIPILSSASSIRGENWSAMPADAKNKPADINVSLPGG* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1555 327 ProSiteProfiles PPC domain profile profile. 139 278 IPR005175 -
Apr10g1555 327 MobiDBLite consensus disorder prediction 1 83 - -
Apr10g1555 327 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 325 IPR039605 GO:0003680
Apr10g1555 327 Gene3D - 144 277 - -
Apr10g1555 327 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 325 - -
Apr10g1555 327 SUPERFAMILY AF0104/ALDC/Ptd012-like 141 260 - -
Apr10g1555 327 MobiDBLite consensus disorder prediction 31 46 - -
Apr10g1555 327 CDD DUF296 143 234 IPR005175 -
Apr10g1555 327 Pfam Plants and Prokaryotes Conserved (PCC) domain 144 257 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1555 Apr-Chr10 27990667 27995517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1555 1 324 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 61.017 1.08e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1555 - - gmx:100801730 536.569