Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1550 ATGGATGTCGCAAGGAAACCAACTATAGGGCAAGAGTTTGAGAGTCTTGAACAAGTATGGCGATTTTGGTGTGAATATGGCAAGCTGTCAGGATTTGGAGTCAGGAAACAATATTTTAACAAGCAAAAGGTAGATGGTGTCATTACGGGTTGCAGATATGTTTGTTGTAAAGAGGGACATCAACAAGAAGATAAAAGAAAACTCCAAGTCACAAAACATCAACCAGAAACTAGAACTGAATGTCTTGCAAGGATATCATTGTCTTTGACAAACAACAACAAATATGTCATTCGTGAGTTTGTTGAAGAGCATAATCACCCATTACAACTTCCCGAAACAATGCATATGCTTGCTTCACATCGTAATATAACTGAAGTCCAAACTCATGAAATTGATTTGCCTGAGGCTTTTGGATTGCGACAAAAGGCATCATCTCAACTAATGACTACACTTGCAGAACACCGAGCTAATGTTGGGTAG 480 0.3875 MDVARKPTIGQEFESLEQVWRFWCEYGKLSGFGVRKQYFNKQKVDGVITGCRYVCCKEGHQQEDKRKLQVTKHQPETRTECLARISLSLTNNNKYVIREFVEEHNHPLQLPETMHMLASHRNITEVQTHEIDLPEAFGLRQKASSQLMTTLAEHRANVG* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1550 159 Pfam FAR1 DNA-binding domain 21 109 IPR004330 -
Apr10g1550 159 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 4 140 - -
Apr10g1550 159 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1550 Apr-Chr10 27953432 27953911 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr10g1550 FAR1 1.8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1550 - - aprc:113850480 239.195