Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1544 ATGAGTTCTCTTCATCTTCTCCTTCCTCTGATTCTATTGGTTGCTCTTTCCACTCCACAACAGGTGGTTCGTGGAAATGCAGAGCTGAGAGCTTTGATAGACCTGAAATCCTCTCTGGACCCAGAAGAGAAGATCCTTGGCTCGTGGATCAGTGATGGTGATCCATGCAGTGGTTCGTTCCTGGGGGTTGTGTGCAATGAGGACAACAAAGTGGCTAATATATCATTACCAGGAAGGGGTCTTTCTGGCCACATCTCTCTAGCTGTGGCTGAACTTAAATGCTTGTCAGGTTTATACTTACATTACAACCATCTCTTTGGGGAGATACCCAGAGAGATTTCAAATCTCAATGAATTGGTTGATCTCTATCTAAACATGAATAATCTATCTGGAACCATTCCTCCAGATATCGGGAACATGACTAGCCTTCAAGTGCTGCAGTTAGGCTATAACCAGCTAGTGGGGAAAATACCTGAGCAGATGGGTTCGTTGAAACAGCTTGATACTGTTGCTTTGCAGCATAACAAGTTAACTGGTCAAATTCCTCTAAGCTTGGGGAACTTGGAGAAGCTAACGAGGCTAAATTTGAGCTTTAACAACTTCAATGGCGTGGTCCCGGCAACACTAGCTGATATTGCAAACTTGGAAATCCTAGATATTCAAAACAATTCTCTTTCAGGGATTGTTCCTTCTGCATTGAGTAGATTAAGGGAAGGATTCCAAGGTTCAAACAACCCAGGTCTTTGTGGAGTTGGGTTTTCTACTTTGACAGCTTGCCACAAAGATAAAGTCTATGATGTTGGGCAGATTACTGGTACTTCAAATGTATCCATAGAAACTAATCCTCCAAAATTTTTCCCAGAGCCTGGAAATACCCAATTGCATTGTAACCAGACCCATTGCTCAAAATCAAGAAGATATCGCCGCCAAAGGCAGAGAATAAGGAATACATCAGATTCTTCTGAAGGCCAACTTAGTCCTGACAAGCCTAAAGAGTTATACAGAAGTCCATCTCCACTTGTTAATCATGAGTATTATTATAATGGTTGGGATTCATCGATTGATGGTCAAAATGCCAGTGAATACTTAAACCATTTTAGATTTAACGTTGATGAGATTGAATCAGCAACACAGTACCTATCCGAGGCCAATTTATTGGGTAAGAGCAAATTCTCAGCAGTCTATAAGGGAGTTCTCAGAGACGGTTCTCTTGTGGCTATTCGAAGCATTAGCATGACATGCTGCAAAACCGAGCAAGCTGAATTTTTAGAGGGGTTGAGACTACTAACCTCATTGAGACATGAAAACATTGTTAAGATGAGAGGTTTCTGTTGCTCAAGAAGTAGAGGTGAATGGTTTTTTATCTATGAATTTGCCACCAGGGGAAATGTCTCTCAATATCTTGACAAAGAAGATGGAAGTGACCATGTGCTTGAGTGGTTCAAGAGGGTTTCTATCATCAGGGGCATTGCAAAAGGTATTGGATATCTGCACAGCAATGAAGCAAGCAAACCGACAATAGTACACCAAAATATTTCAGTTGAAAAAGTAGTTCTTGATGATCAGTTTAACCCCTTAATCATGGATGCTGGCCTCCCTAAGGTTCTTGCAGATGATGTTGTTTTCTCAGCTCTTAAAGTAAGTGCTGCCATGGGATACCTAGCTCCTGAATATGTTACTACTGGACGCTTTACTGAGAAGAGTGACATATATGCATTTGGGGTAATTGTTCTTCAAGTTCTATCTGGAAAGACACTGATTGGGGGTTCAATCCGTATGGCAGTTCAATCTTCCAGATTTGAAGATTTTATTGACTCAAATATGAAGGGGGTATATTCTAAATCTGAAGCAGCTATTCTTTCAAAACTTGCAATGTTGTGCACCCATGAGCTTCCTGAACAAAGGCCAACAATGGTGGAGGTGATTCAAGAGCTGAGCATGTTTTCTGCTCATTCCTCATGA 1962 0.4128 MSSLHLLLPLILLVALSTPQQVVRGNAELRALIDLKSSLDPEEKILGSWISDGDPCSGSFLGVVCNEDNKVANISLPGRGLSGHISLAVAELKCLSGLYLHYNHLFGEIPREISNLNELVDLYLNMNNLSGTIPPDIGNMTSLQVLQLGYNQLVGKIPEQMGSLKQLDTVALQHNKLTGQIPLSLGNLEKLTRLNLSFNNFNGVVPATLADIANLEILDIQNNSLSGIVPSALSRLREGFQGSNNPGLCGVGFSTLTACHKDKVYDVGQITGTSNVSIETNPPKFFPEPGNTQLHCNQTHCSKSRRYRRQRQRIRNTSDSSEGQLSPDKPKELYRSPSPLVNHEYYYNGWDSSIDGQNASEYLNHFRFNVDEIESATQYLSEANLLGKSKFSAVYKGVLRDGSLVAIRSISMTCCKTEQAEFLEGLRLLTSLRHENIVKMRGFCCSRSRGEWFFIYEFATRGNVSQYLDKEDGSDHVLEWFKRVSIIRGIAKGIGYLHSNEASKPTIVHQNISVEKVVLDDQFNPLIMDAGLPKVLADDVVFSALKVSAAMGYLAPEYVTTGRFTEKSDIYAFGVIVLQVLSGKTLIGGSIRMAVQSSRFEDFIDSNMKGVYSKSEAAILSKLAMLCTHELPEQRPTMVEVIQELSMFSAHSS* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1544 653 Gene3D Transferase(Phosphotransferase) domain 1 460 651 - -
Apr10g1544 653 Gene3D Phosphorylase Kinase; domain 1 351 458 - -
Apr10g1544 653 MobiDBLite consensus disorder prediction 280 337 - -
Apr10g1544 653 Pfam Leucine rich repeat 190 237 IPR001611 GO:0005515
Apr10g1544 653 SUPERFAMILY L domain-like 29 237 - -
Apr10g1544 653 SMART LRR_typ_2 140 164 IPR003591 -
Apr10g1544 653 SMART LRR_typ_2 188 211 IPR003591 -
Apr10g1544 653 SMART LRR_typ_2 92 116 IPR003591 -
Apr10g1544 653 SMART LRR_typ_2 212 235 IPR003591 -
Apr10g1544 653 Gene3D Ribonuclease Inhibitor 26 262 IPR032675 -
Apr10g1544 653 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 4-LIKE 11 270 - -
Apr10g1544 653 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 4-LIKE 306 647 - -
Apr10g1544 653 Pfam Protein tyrosine and serine/threonine kinase 384 645 IPR001245 GO:0004672|GO:0006468
Apr10g1544 653 SUPERFAMILY Protein kinase-like (PK-like) 362 647 IPR011009 -
Apr10g1544 653 PANTHER LEUCINE RICH REPEAT KINASE 2 306 647 - -
Apr10g1544 653 PANTHER LEUCINE RICH REPEAT KINASE 2 11 270 - -
Apr10g1544 653 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Apr10g1544 653 ProSiteProfiles Protein kinase domain profile. 380 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1544 Apr-Chr10 27883201 27887268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1544 1 493 Miscellaneous Gene Families AT4G22730 52.434 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Apr10g1544 PK_Tyr_Ser-Thr 1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1544 - - gmx:100784155 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1544 10 27883201 27887268 Apr10g1544 10 27883201 27887268 ECH