Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1536 ATGGTTCTTGCTTTGTTGGTCATTTCAACGGTTACTTGGTATGCATGGCTCTACTTCCTCAAACCCAAAGCCCAAAAGCTACCACCGGGTCCACCAGGCCTTCCTTTCCTCGGGAACCTTCTATCCTTGGGCCCGGACCTTCAGTGTTACTTCACCGAATTGGCCCAGATCCACGGCCCAATTTTTAAGCTCCGTCTCGGGAGCAAGCTCGGCATCGTGTTGTCGTCACCTTCTGCGGTTCGCGAGGTGCTCAAAGACAACGACATCGTTTTCGCGAACCGTGACGTTCCCGTCGCCGGTTGGGCAGCCACCTACGGTGGATCCGACATAGCATGGGCCCCGTATGGACCCGAATGGCGTATGCTGAGGAAAGTGTGTGTGCTGAAGATGCTGAGCAACCACACCCTGAATTCCGTTTACGATCTCCGCAGGAAAGAGATGCGCAAAACGATGTCGTATTTGTACAGTCGAGTGGGGTGTTCGGTGAACGTTGGGGAACAGGTGTTTCTGACGGTGATGAACGTGATAACGAATATGATGTGGGGCGCATCAGTGGAAGGAGCGGAGAGAGAAAGTTTGGGGGCGGAGTTTAGGGAGTTGGTGACGGAGATGATGGAGATTTTGGGGAAGCCGAACCTGTCGGATTTTTTCCCCGGTTTGGCCCGGTTCGATTTGCAAGGGCTGGTGAAGCATATGCGTTCGTTGGTGCCCCGGTTCGACGGAATATTTGAGAAGATGATTGGTGAACGGGTGAAGATGGAAGGGAAAGAGGAGAGGAAAGAAAGCAAAGATTTTTTGCAGGTTTTGTTGAAATTGAAGGATGAAGGTGGCGGTTCCACCACACCACTCACCATCGCACATGTTAAGGCTCTCCTCATGGACATGGTTGTGGGTGGAACTGACACGTCCTCGAACACAATTGAGTTTGCGATGGCAGAAATGATGCACAAACCCGAGGTGATGAAGAAAGTCCAAGAGGAGTTAGAAGCTGTTGTTGGGAAAGACAGCATGGTCGAAGAGTTTCACATTCATAAGTTGCCTTACTTGCTAGCTGTGATGAAAGAAACTCTTCGGTTGCACCCTGTGCTTCCACTTCTAGTACCTCACAGCCCTAGTGAAACCACCACTGTGGGAGGCTATACAATCCCAAAGGGATCTCGGGTATTCGTGAATGTGTGGGCCATTCATAGAGACCCTTCAATTTGGGAGAAACCACTTGAATTTGATCCTACAAGATTTTTGGATGCTAAATTTGATTTCAGTGGGAATGATTTCAACTATTTTCCCTTTGGGTCTGGACGAAGAATTTGTGCTGGATTAGCAATGGCAGAGAGGACAGTTTTATATTTCCTCGCCACACTTGTGAACTTATTTGATTGGACCATACCCAAAGGAGAAAAGCTTGATGTGTCCGACAAATATAGCATTATTCTCAAAAAGAGCAAACCTCTCGTTGCTATTCCCACCCCTCGAATGTCCAACCCAGATTTTTATAAAGAGAATTAA 1506 0.4854 MVLALLVISTVTWYAWLYFLKPKAQKLPPGPPGLPFLGNLLSLGPDLQCYFTELAQIHGPIFKLRLGSKLGIVLSSPSAVREVLKDNDIVFANRDVPVAGWAATYGGSDIAWAPYGPEWRMLRKVCVLKMLSNHTLNSVYDLRRKEMRKTMSYLYSRVGCSVNVGEQVFLTVMNVITNMMWGASVEGAERESLGAEFRELVTEMMEILGKPNLSDFFPGLARFDLQGLVKHMRSLVPRFDGIFEKMIGERVKMEGKEERKESKDFLQVLLKLKDEGGGSTTPLTIAHVKALLMDMVVGGTDTSSNTIEFAMAEMMHKPEVMKKVQEELEAVVGKDSMVEEFHIHKLPYLLAVMKETLRLHPVLPLLVPHSPSETTTVGGYTIPKGSRVFVNVWAIHRDPSIWEKPLEFDPTRFLDAKFDFSGNDFNYFPFGSGRRICAGLAMAERTVLYFLATLVNLFDWTIPKGEKLDVSDKYSIILKKSKPLVAIPTPRMSNPDFYKEN* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1536 501 PANTHER OS08G0547900 PROTEIN 2 499 - -
Apr10g1536 501 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Apr10g1536 501 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 2 499 - -
Apr10g1536 501 Pfam Cytochrome P450 28 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 Gene3D Cytochrome P450 20 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1536 501 SUPERFAMILY Cytochrome P450 28 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1536 Apr-Chr10 27827541 27830873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1536 4 498 Cytochrome P450 AT4G12300 59.639 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1536 - - gmx:100787507 768.844