Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1531 ATGGATTCTTTCCGTTTAATTGCTCTCACTTTGGCGTTGTGCTTCCTTATTCATTTTGATCAAGGAAGTGAACTGACCCCTACCACTGAGACCACTGCTACAAGCAGTTCAAAAACGTACATTATTCATGTGAAGGGACCAGAGAGCAAGACATTTACTGAATTAGAGGATTTAGAGAGTTGGTATCATTCATTCATGCCACCACCTACTATTATGAGCACTAAGGAACAGCCACGAGTGATATATTCATTCAGGAATGTGATGAGTGGTTTTGCTGCAAGACTCACTCAAGAAGAGCTGAGAGCTGTGGAAAAGAAGAATGGTTTTATTTCAGCTCATCCTGAAAGGATACTACATCTTCAAACCACACATAGCCCAAAATTCTTGGGGTTGCAGCCACAAATGGGATTATGGAAGGAATCAAACTTTGGAAAGGGAGTTATTATTGGGGTGCTGGATTCTGGAATCACTCCTGGTCATCCTTCATTCAGTGATGTAGGAATGCCGCCACCACCATCCAAATGGAAAGGGAGGTGTGAACTTAATGTGACAGCTTGTAACAACAAACTAATTGGAGCAAGGTCATTCAACCTCGCAGCTATGGCAATGAAAGGAGAGAAAGCAGAGGCCCCGATTGATGAGGATGGACATGGGACTCACACAGCAAGCACAGTTGCTGGTGCTTTTGTTGATTATGCTGAAGTACTAGGAAATGCCAAAGGCACAGCAGCAGGGATAGCCCCTCACTCTCACCTTGCGATTTATAAAGTATGCTTTGGAGAAGACTGCCCTGAGAGCGATATACTGGCTGCAATAGAAGCAGCTGTGGAGGATGGCGTAGATGTACTATCAATATCTCTTGGTCTAAGTGAGCCCCTTCCTTTTTTCAATGATAGCACTGCAGTAGGTGCATTTGCAGCTACTCAGAGGGGAATCATTGTAAGTTGTGCAGCAGGAAACTTTGGCCCTTTCAATGGATCCTTAATTAACGGAGCCCCATGGATCCTCACAGTTGGAGCAAGCACCATCGACAGAAGCATTGTAGCAACAGCAAAACTAGGAGATGGGCATGAATTTGATGGTGAATCTGTTTTCCAGCCTTCCAATTTTTCTCCAACACTGCTACCCTTAGTGTATGCTGGAAAGAATGGCAATCAAAACTCTGCATTCTGTGCTAATGGGTCCTTGCATGACGTTGATTTCAGAGGCAAGGTTGTTTTGTGCGAGAGAGGAGGGGGTATAGCAAGAATTGCCAAAGGAGGGGAAGTAAAAAGAGTAGGAGGTGCAGCCATGATTCTAATGAATGATGAAACCAATGGCTTCAGTCTCGCAGCTGATGTACATGTCCTACCTGCAACACATGTAAGTTATGATGCTGGACTTAAGATTAAAGTATATATAAATTCAACTGCAACCCCTACAGCAACCATTTTATTCAAGGGAACTATAATTAGAAAGTCCCTATCTCCTGCCATTGCATCCTTCTCTTCAAGAGGTCCCAACTTGCCAAGTCCTGGTATTTTGAAACCAGACATCGTAGGACCAGGCGTGAACATCCTAGCTTCCTGGCCATTCCCCCTGGATAACACCACCAATTCGAAACTCACTTTCAACATTATGTCTGGCACATCAATGTCATGCCCCCATCTTAGTGGCGTTGCTGCTTTGCTCAAAAGTTCTCATCCTCAATGGTCACCAGCTGCTATAAAATCTGCCATAATGACTTCTGCAGACATAATAAATTTAGAACACAAACTAATTGTTGATGAAACACTTCATCCAGCAGATATCTTTGCCACAGGTTCCGGCCAGGTGAATCCATCAAATGCAAACGACCCTGGATTAGTTTATGATATCCAACCTGATGATTATATACCTTATCTGTGTGGTTTAGGCTATAGTGATACACAAGTTGGGCTCATTGCACATAAAACGATTAAGTGCTCTGAGACTTCAAGCATTCCCGAAGGAGAGCTCAACTATCCCTCATTTTCGGTTGTGCTTGCTTCCTCGCAGACATTCACAAGGACTGTAACAAACGTGGGTGAGGCCTATTCATCTTACGTTGTCATGGTTACGGTACCAGAAGGGGTTGATGTGAAGGTCCAACCAGATAAACTTGACTTTTCAAAGGTGAACCAGAAAGAGACGTATTCAGTGACATTCAGCCGTGTAGGATCGGGTTATGAGATGGGGCAATATGCTCAAGGGTTTTTACAGTGGGTCTCTGCTAAACACACTGTAAGGAGCCCTATTTCGGTCAAATTTGTTTAA 2274 0.4376 MDSFRLIALTLALCFLIHFDQGSELTPTTETTATSSSKTYIIHVKGPESKTFTELEDLESWYHSFMPPPTIMSTKEQPRVIYSFRNVMSGFAARLTQEELRAVEKKNGFISAHPERILHLQTTHSPKFLGLQPQMGLWKESNFGKGVIIGVLDSGITPGHPSFSDVGMPPPPSKWKGRCELNVTACNNKLIGARSFNLAAMAMKGEKAEAPIDEDGHGTHTASTVAGAFVDYAEVLGNAKGTAAGIAPHSHLAIYKVCFGEDCPESDILAAIEAAVEDGVDVLSISLGLSEPLPFFNDSTAVGAFAATQRGIIVSCAAGNFGPFNGSLINGAPWILTVGASTIDRSIVATAKLGDGHEFDGESVFQPSNFSPTLLPLVYAGKNGNQNSAFCANGSLHDVDFRGKVVLCERGGGIARIAKGGEVKRVGGAAMILMNDETNGFSLAADVHVLPATHVSYDAGLKIKVYINSTATPTATILFKGTIIRKSLSPAIASFSSRGPNLPSPGILKPDIVGPGVNILASWPFPLDNTTNSKLTFNIMSGTSMSCPHLSGVAALLKSSHPQWSPAAIKSAIMTSADIINLEHKLIVDETLHPADIFATGSGQVNPSNANDPGLVYDIQPDDYIPYLCGLGYSDTQVGLIAHKTIKCSETSSIPEGELNYPSFSVVLASSQTFTRTVTNVGEAYSSYVVMVTVPEGVDVKVQPDKLDFSKVNQKETYSVTFSRVGSGYEMGQYAQGFLQWVSAKHTVRSPISVKFV* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1531 757 CDD Peptidases_S8_3 118 578 IPR034197 -
Apr10g1531 757 Gene3D - 628 756 - -
Apr10g1531 757 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Apr10g1531 757 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Apr10g1531 757 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Apr10g1531 757 CDD PA_subtilisin_like 350 477 - -
Apr10g1531 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 121 IPR037045 -
Apr10g1531 757 Gene3D - 344 484 - -
Apr10g1531 757 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 35 754 - -
Apr10g1531 757 SUPERFAMILY Subtilisin-like 120 615 IPR036852 GO:0004252|GO:0006508
Apr10g1531 757 Pfam Peptidase inhibitor I9 39 120 IPR010259 -
Apr10g1531 757 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 149 160 IPR023827 -
Apr10g1531 757 ProSiteProfiles Serine proteases, subtilase domain profile. 128 611 - -
Apr10g1531 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 754 IPR045051 -
Apr10g1531 757 Pfam PA domain 376 463 IPR003137 -
Apr10g1531 757 Gene3D Peptidase S8/S53 domain 146 624 IPR036852 GO:0004252|GO:0006508
Apr10g1531 757 Pfam Subtilase family 144 577 IPR000209 GO:0006508|GO:0008236
Apr10g1531 757 Pfam Fibronectin type-III domain 658 754 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1531 Apr-Chr10 27756899 27759359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1531 11 754 Subtilisin-like Serine Gene Family AT1G04110 43.316 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1531 - - gmx:100785376 1251.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1531 10 27756899 27759359 Apr10g1531 10 27756899 27759359 ECH
Apr10g1531 10 27756899 27759359 Apr7g0638 7 13109681 13111975 PCT