Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1529 ATGGACGACTACGTGTTCCAATTTGACCAAACAAACCATTGTTCCAACGTTTTCCCCCTACCTTCTTGTCCCCAAAAGAAGATCATCAGCCCCAATCTCCCCTCCCACCTGCTGTTGAGCTTTGGAAATTGGCGTCATGAATCATCACCATTATTATCTTTCGATGAACTTGATCGTAAACCTGGTGAAGTCAAAAAGAGGAAGATTATGCACAGAGATGTTGAAAGACAAAGAAGGCAAGAAATGGCCACTCTTCACGCTTCTCTACGGTCATTACTCCCTGTAGAATACCTCAAGGGAACGCGTTCAATATCAGATCACATGCACCAGGCGATGAATTATATCAAACATCTTCAAAAAAAGATCGAGGAGCTAAGTAACAAGAGAGATGGGCATAAAAAATTGTGCAACCCTAGCTCTTACCACATGGAAAAAACGGTGGAAAATTCCGAAGCAGCAAAACAGGATGTGGTGACAGTTAGACAGTGTTGGATAGGAGTCGAGGTTGTCATAAACACTGAACATGAAGAAGGGCTTCCTCTTTCTAGAGTGCTCCAAGCTCTAGTCAGAGAAGGACTCAGAATTGTCAATTGCAATTCAACTAAAGTGAAAGGAAGGTTAATTCATACCATTGAATCGGAGGTGAGCAATGATGGAAGGAAAATGGACCATTCTGAGCTACAACAAAAGCTAACAAGCTTAAGCTTAGCTAGATTTTTGTCATGA 726 0.4187 MDDYVFQFDQTNHCSNVFPLPSCPQKKIISPNLPSHLLLSFGNWRHESSPLLSFDELDRKPGEVKKRKIMHRDVERQRRQEMATLHASLRSLLPVEYLKGTRSISDHMHQAMNYIKHLQKKIEELSNKRDGHKKLCNPSSYHMEKTVENSEAAKQDVVTVRQCWIGVEVVINTEHEEGLPLSRVLQALVREGLRIVNCNSTKVKGRLIHTIESEVSNDGRKMDHSELQQKLTSLSLARFLS* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1529 241 CDD bHLH_AtORG2_like 67 130 - -
Apr10g1529 241 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 135 IPR036638 GO:0046983
Apr10g1529 241 Gene3D - 60 151 IPR036638 GO:0046983
Apr10g1529 241 PANTHER HELIX-LOOP-HELIX DNA-BINDING SUPERFAMILY PROTEIN, PUTATIVE-RELATED 59 234 - -
Apr10g1529 241 Coils Coil 108 135 - -
Apr10g1529 241 Pfam Helix-loop-helix DNA-binding domain 67 119 IPR011598 GO:0046983
Apr10g1529 241 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 66 118 IPR011598 GO:0046983
Apr10g1529 241 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 59 234 IPR015660 GO:0003700|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1529 Apr-Chr10 27743859 27745103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1529 68 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 43.931 2.96e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr10g1529 HLH 8.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1529 - - aprc:113851145 488.419